Gene Hlac_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1164 
Symbol 
ID7400973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1170471 
End bp1171325 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID643708229 
Producthypothetical protein 
Protein accessionYP_002565828 
Protein GI222479591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.828155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0879348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCT CACTCGACCG ACTGACGGAG CTTAGGCGGG CGCTCCCGGT GACGGCGGCG 
GCGATGTTCG TCGTCGCCCT GCTGGTGCCC GTCTGGCGGA TCGCCTTCGA AGCGCCTCAG
TACCCTGAGG GCCTGCTCGT CGAGCTGTAC GCGTACCCCC GCCTCGGCGG CGACTACGCC
GAGGTGCAGG CGCTGAACCA CTACGTCGGG TTCTACTACC CGGACCCGGT GTTCGTCGAT
CCGAACTACG CGGTCCATCC GGACGCGATC GCCGCGCCGG AGTGGATCCT CGGACCCGTC
GTGTTCCTCG CGGTGGCCGC CGCGGGCGTG TTCGTCGCGC TCGCGCCCAC CGACCGAAAG
CTCCGTCTGG GGCTGCTCGG CCAGTTGGCC GGGGCGACGG TGGCGTTCGT GGGGACGTTC
GCGATCGTGC AGTACCGGCT GTTCCAGGCG GGTCACGCGC TCGGCGAGAG CGCGCCGGTC
GTCGGAGTGC GGGAGTTCAC CCCGCCGCTT CTGGGCGGCT ACGAGATCGC CAACATCAGC
GGGGTGGCGT GGTTCGGTCC CGGCGGCTAC CTCGCGGGGA TCGGGTTTCT CCTCCTCGTC
GTCGCCTACC TGCTCCGCGA CTCGCAGGTC ACGGTCGGCG AGGCGCCCGG GAGGGTCCGA
GATCGCCTCT CGGGAGGTAA CGAAGACGGC GACGGCGACG GAGAGCCCGA ACAGATCGGT
CCGGCCGCCG AGGAAATTGC CGAGGCACAG ACCGCCGCGA ACCCCGAATC CGTCTCGACC
CCGGACGGGC CGACATCGGA CGACTCGGGA ACGGACGGAT CGACCCAAAA CGGACCCAAA
ACGGGGGTAA ACTGA
 
Protein sequence
MTASLDRLTE LRRALPVTAA AMFVVALLVP VWRIAFEAPQ YPEGLLVELY AYPRLGGDYA 
EVQALNHYVG FYYPDPVFVD PNYAVHPDAI AAPEWILGPV VFLAVAAAGV FVALAPTDRK
LRLGLLGQLA GATVAFVGTF AIVQYRLFQA GHALGESAPV VGVREFTPPL LGGYEIANIS
GVAWFGPGGY LAGIGFLLLV VAYLLRDSQV TVGEAPGRVR DRLSGGNEDG DGDGEPEQIG
PAAEEIAEAQ TAANPESVST PDGPTSDDSG TDGSTQNGPK TGVN