Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1164 |
Symbol | |
ID | 7400973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1170471 |
End bp | 1171325 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708229 |
Product | hypothetical protein |
Protein accession | YP_002565828 |
Protein GI | 222479591 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.828155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0879348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCCT CACTCGACCG ACTGACGGAG CTTAGGCGGG CGCTCCCGGT GACGGCGGCG GCGATGTTCG TCGTCGCCCT GCTGGTGCCC GTCTGGCGGA TCGCCTTCGA AGCGCCTCAG TACCCTGAGG GCCTGCTCGT CGAGCTGTAC GCGTACCCCC GCCTCGGCGG CGACTACGCC GAGGTGCAGG CGCTGAACCA CTACGTCGGG TTCTACTACC CGGACCCGGT GTTCGTCGAT CCGAACTACG CGGTCCATCC GGACGCGATC GCCGCGCCGG AGTGGATCCT CGGACCCGTC GTGTTCCTCG CGGTGGCCGC CGCGGGCGTG TTCGTCGCGC TCGCGCCCAC CGACCGAAAG CTCCGTCTGG GGCTGCTCGG CCAGTTGGCC GGGGCGACGG TGGCGTTCGT GGGGACGTTC GCGATCGTGC AGTACCGGCT GTTCCAGGCG GGTCACGCGC TCGGCGAGAG CGCGCCGGTC GTCGGAGTGC GGGAGTTCAC CCCGCCGCTT CTGGGCGGCT ACGAGATCGC CAACATCAGC GGGGTGGCGT GGTTCGGTCC CGGCGGCTAC CTCGCGGGGA TCGGGTTTCT CCTCCTCGTC GTCGCCTACC TGCTCCGCGA CTCGCAGGTC ACGGTCGGCG AGGCGCCCGG GAGGGTCCGA GATCGCCTCT CGGGAGGTAA CGAAGACGGC GACGGCGACG GAGAGCCCGA ACAGATCGGT CCGGCCGCCG AGGAAATTGC CGAGGCACAG ACCGCCGCGA ACCCCGAATC CGTCTCGACC CCGGACGGGC CGACATCGGA CGACTCGGGA ACGGACGGAT CGACCCAAAA CGGACCCAAA ACGGGGGTAA ACTGA
|
Protein sequence | MTASLDRLTE LRRALPVTAA AMFVVALLVP VWRIAFEAPQ YPEGLLVELY AYPRLGGDYA EVQALNHYVG FYYPDPVFVD PNYAVHPDAI AAPEWILGPV VFLAVAAAGV FVALAPTDRK LRLGLLGQLA GATVAFVGTF AIVQYRLFQA GHALGESAPV VGVREFTPPL LGGYEIANIS GVAWFGPGGY LAGIGFLLLV VAYLLRDSQV TVGEAPGRVR DRLSGGNEDG DGDGEPEQIG PAAEEIAEAQ TAANPESVST PDGPTSDDSG TDGSTQNGPK TGVN
|
| |