Gene Hlac_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1161 
Symbol 
ID7400970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1167229 
End bp1168227 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content74% 
IMG OID643708226 
ProductABC-type transport system involved in multi-copper enzyme maturation permease component 
Protein accessionYP_002565825 
Protein GI222479588 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.171966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.284893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGA GGGGTACCGT CGAGGACGGC GGGCGCGACG GAGACGCGGC GCGGACCGAG 
CCGACCCCGG ACGGTGGGAT CGCCCTCGAC GGGGCGTCCG CGGCGAGCGG GGCGGAGGCC
TCGACAGCGG GGTCGACGGA CGCCGACGAC TCCGACACCG CTCACGCGGC CGACGCCGAC
TCGATCTCTA TCCCGCTCCC GCGGCCCGGA ATCGTCGCGC GGATCGCGCG GCGGGAAACG
CGGCTGACGA CCCGGCGCGG GTGGGCGCTC GGTCTAACGG TCGTCTTCGC GGCCTTCGGG
TTCCTGTTGG CGACGTTCAG CGGTTCCGGA GTCGCGCCGA CTGGTTACGA GCCGGTGGTC
GCGAGCTACG TCGAGCTGGC GACGTTCCTC GTCCCGCTGG CGGCGCTGGC GTTCGGCCAC
GGCGCGGTCG TCGGCGCGGC CGAGCGCGGG CGTCTCGGTG TCGTCCTGAC ACTCCCGGTC
TCGCGCGCCG AGACAGCGAT CGGGGTGTTC GCCGGCCGTG CGGCCGTCCT CGGATCGGCG
GTGATACTCG GCTTCGGCGT TCCCGGTCTG CTGCTGCTCC GCGAGTACGG GCTCGCCGGC
TGGCCGACGT TCGCGTGGTT CCTGTTCGCG ACCGTCGCCG TCGCCGTCGC CCTGCTCGGG
ATCGGGGTGG GAATCTCCGC GCTCGCGCCC ACGTCGACGA TGGCGCTCGC GGGCGCGCTG
CTCGTGTGGG CGTGGGTCGC CTTAGTCCAC GACCTGCTCG CGATGGGCGT GCTCGCGGCG
CTCGACGGCG CGAACGGATT CGTCGCCGTC GCGGTCGCAG CCAACCCGGT CTCGACCTAC
CGGCTGCTCG CGCTCGCCCC GACCGACGCG GGCGGCGCCG GGCTCGCGGC CGCGCTCGAC
GGCGGACTCT CGGTCGGCGT GCTCGTCGGC GTCCTGCTTG GGTGGGTCGC ACTCGGCGTG
GTCGTCGCCG CCGTCGCGAT GCGCGTAAAG CGGATTTAA
 
Protein sequence
MPERGTVEDG GRDGDAARTE PTPDGGIALD GASAASGAEA STAGSTDADD SDTAHAADAD 
SISIPLPRPG IVARIARRET RLTTRRGWAL GLTVVFAAFG FLLATFSGSG VAPTGYEPVV
ASYVELATFL VPLAALAFGH GAVVGAAERG RLGVVLTLPV SRAETAIGVF AGRAAVLGSA
VILGFGVPGL LLLREYGLAG WPTFAWFLFA TVAVAVALLG IGVGISALAP TSTMALAGAL
LVWAWVALVH DLLAMGVLAA LDGANGFVAV AVAANPVSTY RLLALAPTDA GGAGLAAALD
GGLSVGVLVG VLLGWVALGV VVAAVAMRVK RI