| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1155 |
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| Symbol | |
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| ID | 7400964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1162793 |
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| End bp | 1163536 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643708220 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_002565819 |
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| Protein GI | 222479582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.376483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACAGG CACGCCTACT GGTCGATTTG CCCGACGGAC CGTGGATAGC CGACGTGTCG
CGCGACTTCC CGGACGCCGG GTTCCGCGTG CTCACCGCGG TGCCGGACGA GAGTGCCGGC
TTCGCGCTCA TCAGACTGAC TGCCCGCGAC GTCGACGACG TGCTCGCGGC GATGCGGGAT
CACGAGGCGC TCGCGAAGGT GTCGGTGATG GCGCGGGGCG ACGGGGTCGC GACCGTTCGG
ATCGAGACGA ACGCCCCGCT GCTTCTGGTC GCCGCGAAGC GCTCGGGGCT CCCGATCGAG
ATGCCGCTGG ACATCGAGAA CGGCGTGGCG GAGGTCGACG TCACCGGCGA ACACGAGCGC
GTCGCGGCGC TCGGAAAGCG GTTCGACGAG ATGGGGCTGG AGTACGAACT CGATCGCGTC
CGCCAGCGCG TCGATCCGGT CCGGCTGCTG ACGGACCGCC AGCAGGAGCT CCTGCTCACG
GCCGTGGAGT TGGGGTACTA CGACGTGCCG CGCCGGTTCA CCCTGACGGA AGTCGCCGAC
CACGTCGGAA TCGCGAAGTC GACGTGCAGC GAGACGCTCC AGCGGGTCGA ACGGACCGTG
GTGCGCGAGT TCGTCGACGA CCTCCCGACC CGACCGCTCG ACGAGGAGGT CGACGCGGCG
GGCGACAGTG CGAGCGACGG CGGCGACGCC GCCTCCGAAA CCGACGCGGA ATCGGCTCCG
AACCGACCAA CATACCACTC ATGA
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| Protein sequence | MPQARLLVDL PDGPWIADVS RDFPDAGFRV LTAVPDESAG FALIRLTARD VDDVLAAMRD
HEALAKVSVM ARGDGVATVR IETNAPLLLV AAKRSGLPIE MPLDIENGVA EVDVTGEHER
VAALGKRFDE MGLEYELDRV RQRVDPVRLL TDRQQELLLT AVELGYYDVP RRFTLTEVAD
HVGIAKSTCS ETLQRVERTV VREFVDDLPT RPLDEEVDAA GDSASDGGDA ASETDAESAP
NRPTYHS
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