Gene Hlac_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1146 
Symbol 
ID7400955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1153228 
End bp1154016 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID643708211 
ProductABC transporter related 
Protein accessionYP_002565810 
Protein GI222479573 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG GTGCGCTCCC CAAGCAGGAC GCCGTCCTGC GCGTCGACGA TCTTCAGAAG 
TCGTTCGGCG GCCTCGCCGC GACGGACCAC GCCTCGTTCG CGGTCGAGCG CGGGACGATC
ACCGGACTCA TCGGTCCGAA CGGCGCCGGG AAATCGACGC TGTTCAACCT CATCTCCGGC
TTCTACGAGC CGGACGGCGG GACCGTCGAG GTGAACGGGA CCGACGTGAC CGGTATGGAA
CCGTATCAGG TGGCCGATCA CGGGCTCATT CGGACGTTCC AGACCCCTCG CAAGCTGGAG
GGGATGACCG TCCGCGAGGC GATGTTGGTC GGGCCCCGGA ACCAGCCCGG CGAGTCCTTT
ATCAAGCTGT TCGCCACGCC GGGGGCGGTC GGCGAGAGCG AGTCGGCGAA CCTCGCCGAG
GCCGAGCGGA TCTTAGAGGA TTTCGAGATC GACCACCTCG CGGCACAGCC CGCGACCGAC
ATCTCCGGCG GTCAGATGAA GCTCGTCGAG CTCGCGCGGG CGATGCTCGC CGAGCCGGAG
GTGCTGCTGC TCGACGAGCC GGTCGCAGGG GTGAACCCGA CGCTGGCGAA GAAGCTCAAA
GACCAGATTC GGCGGCTCAA CGACCAAGGG ACGACGTTCC TGCTGATAGA ACACGACATG
GAGTTCGTGA TGGATCTGGC CGACCCGATC GTCGTCCTCG ATCAGGGACA CGTCCTGACC
GAAGGGACGC CGGAGGGGGT CCGAAGCGAC GATCGCGTTA TCGACGCGTA CCTCGGAGGC
GGCACATGA
 
Protein sequence
MSEGALPKQD AVLRVDDLQK SFGGLAATDH ASFAVERGTI TGLIGPNGAG KSTLFNLISG 
FYEPDGGTVE VNGTDVTGME PYQVADHGLI RTFQTPRKLE GMTVREAMLV GPRNQPGESF
IKLFATPGAV GESESANLAE AERILEDFEI DHLAAQPATD ISGGQMKLVE LARAMLAEPE
VLLLDEPVAG VNPTLAKKLK DQIRRLNDQG TTFLLIEHDM EFVMDLADPI VVLDQGHVLT
EGTPEGVRSD DRVIDAYLGG GT