Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1146 |
Symbol | |
ID | 7400955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1153228 |
End bp | 1154016 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708211 |
Product | ABC transporter related |
Protein accession | YP_002565810 |
Protein GI | 222479573 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAGG GTGCGCTCCC CAAGCAGGAC GCCGTCCTGC GCGTCGACGA TCTTCAGAAG TCGTTCGGCG GCCTCGCCGC GACGGACCAC GCCTCGTTCG CGGTCGAGCG CGGGACGATC ACCGGACTCA TCGGTCCGAA CGGCGCCGGG AAATCGACGC TGTTCAACCT CATCTCCGGC TTCTACGAGC CGGACGGCGG GACCGTCGAG GTGAACGGGA CCGACGTGAC CGGTATGGAA CCGTATCAGG TGGCCGATCA CGGGCTCATT CGGACGTTCC AGACCCCTCG CAAGCTGGAG GGGATGACCG TCCGCGAGGC GATGTTGGTC GGGCCCCGGA ACCAGCCCGG CGAGTCCTTT ATCAAGCTGT TCGCCACGCC GGGGGCGGTC GGCGAGAGCG AGTCGGCGAA CCTCGCCGAG GCCGAGCGGA TCTTAGAGGA TTTCGAGATC GACCACCTCG CGGCACAGCC CGCGACCGAC ATCTCCGGCG GTCAGATGAA GCTCGTCGAG CTCGCGCGGG CGATGCTCGC CGAGCCGGAG GTGCTGCTGC TCGACGAGCC GGTCGCAGGG GTGAACCCGA CGCTGGCGAA GAAGCTCAAA GACCAGATTC GGCGGCTCAA CGACCAAGGG ACGACGTTCC TGCTGATAGA ACACGACATG GAGTTCGTGA TGGATCTGGC CGACCCGATC GTCGTCCTCG ATCAGGGACA CGTCCTGACC GAAGGGACGC CGGAGGGGGT CCGAAGCGAC GATCGCGTTA TCGACGCGTA CCTCGGAGGC GGCACATGA
|
Protein sequence | MSEGALPKQD AVLRVDDLQK SFGGLAATDH ASFAVERGTI TGLIGPNGAG KSTLFNLISG FYEPDGGTVE VNGTDVTGME PYQVADHGLI RTFQTPRKLE GMTVREAMLV GPRNQPGESF IKLFATPGAV GESESANLAE AERILEDFEI DHLAAQPATD ISGGQMKLVE LARAMLAEPE VLLLDEPVAG VNPTLAKKLK DQIRRLNDQG TTFLLIEHDM EFVMDLADPI VVLDQGHVLT EGTPEGVRSD DRVIDAYLGG GT
|
| |