| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1145 |
|---|
| Symbol | |
|---|
| ID | 7400954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1152482 |
|---|
| End bp | 1153231 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643708210 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002565809 |
|---|
| Protein GI | 222479572 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.457841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ACACCACCCG GCCCGTAGGG GCCACCGACC GAGCCGATCC CGTGCTCTCG
CTGTCGAACG TCGACAGTGG GTACGGCGAG GTGCAGGTGC TCGACGACTG CTCGGTCCGG
CTCGATCCGG GCGAGATCGT CTGTCTCGTC GGCCCGAACG GGGCCGGAAA ATCGACCGTC
CTCAAGACGG CGTTCGGGAT GTTGACGCCG TGGACGGGGA CGGTGATGTA CCACGGCCGC
GATATCGGCG GAATGGCGCC CGAAGAGATC GTCCGCGAGG GGATCGGCTA CGTCCCTCAG
ACCGACAACG TGTTCGGCTC GCTGACGATC GACGAGAACC TCCGGATGGG CGGCGTCGCC
CGCGACGGCG GTCTCGAAGC GGTGATTGAG ACGCTGTACG ACCGATTCCC GATCATCGAG
GAGAAGCGGA CCGCGAAGGC CCGGACGCTC TCCGGCGGCC AGCGGCAGGT GCTGGCGTTC
GCTCGGGCGC TCGTGATGGA ACCCGACGTG CTGCTCATCG ACGAGCCGTC CGCAGGGCTC
GCGCCCAACA CGGCCGACGA CGTGTTCGAG GACGTACAGG AGGTCAACGA CATGGACACC
GCGATCCTGA TGGTCGAACA GAACGTGACG AAGGGGCTCG GTATCTCCGA CCGGGGCTAC
GTCCTCGATC AGGGGACGGT CCGGTTCGAG GGGACGCCGG AGGAACTGCT CAACGACGAG
GAGGTCTCGC AGCTGTACCT CGGCGGCTGA
|
|---|
| Protein sequence | MSDDTTRPVG ATDRADPVLS LSNVDSGYGE VQVLDDCSVR LDPGEIVCLV GPNGAGKSTV
LKTAFGMLTP WTGTVMYHGR DIGGMAPEEI VREGIGYVPQ TDNVFGSLTI DENLRMGGVA
RDGGLEAVIE TLYDRFPIIE EKRTAKARTL SGGQRQVLAF ARALVMEPDV LLIDEPSAGL
APNTADDVFE DVQEVNDMDT AILMVEQNVT KGLGISDRGY VLDQGTVRFE GTPEELLNDE
EVSQLYLGG
|
|---|
| |