Gene Hlac_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1117 
Symbol 
ID7400926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1123292 
End bp1124071 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content71% 
IMG OID643708182 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_002565781 
Protein GI222479544 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGGG ACACGATCGA CCTCGACATC GACGACGACA GCGACGTGGC GACGATCACC 
GTCGACCGCC CGGAGCAGCT CAACGCCCTC ACTGTCGACA CCCTCGAAGC GATCGAGGAG
GCACTGGCGG ACGCCGAAGC GGCAGGCGCT CGTGCGCTTG TGTTCGCCGG CGCGGGCGAC
GAGGCGTTCG TCGCGGGCGC CGACATCTCC TACATGGTCG AACTGTCGAC GCCGGAAGCG
CAGGCGTACG CCGAACTCGG TCACCGCGTC GCGGACGCGA TCGAGTCGTT CCCCGCGCCG
ACGGTCGCGG CGATCGACGG CCACGCGTTC GGCGGTGGCT CCGAGCTCGC GCTAGCCTGT
GACCTCCGGG TGGCTGCCGA GAGCGCCGTG ATCGGACAGA CCGAGATCGA TCTCGGGATC
ATCCCCGGTT GGGGCGGGAC CCAGCGGCTC TCGCGGCTGG TCGGCGACGA GACCGCGAAG
CGACTCGTCT TCCTCGGCGA GCGGATCGAC GCGAGCGAGG CGGCCGACAT CGGTCTCGTC
GGCGAGGTCG TCGCCGACGA CGCGTTCGAC GACCGGATCG ACGAGCTGTC GCGGGAGCTG
GCCGCGAAGC CCGCGTTCGC GATGCGCGCG GCGAAGGAGG CGCTCAACGC CGCCCGCGAC
GGGACGCAGG CCGGCGGGCT CGCCTTGGAG CGCCGGGCGT GGTCCGGACT GTTCGGCACC
CACGACCAGC GCGAGGGGAT GGCGGCGTTC TTGGAGAAGC GGGAGCCCGA CTTCGAGTAA
 
Protein sequence
MTWDTIDLDI DDDSDVATIT VDRPEQLNAL TVDTLEAIEE ALADAEAAGA RALVFAGAGD 
EAFVAGADIS YMVELSTPEA QAYAELGHRV ADAIESFPAP TVAAIDGHAF GGGSELALAC
DLRVAAESAV IGQTEIDLGI IPGWGGTQRL SRLVGDETAK RLVFLGERID ASEAADIGLV
GEVVADDAFD DRIDELSREL AAKPAFAMRA AKEALNAARD GTQAGGLALE RRAWSGLFGT
HDQREGMAAF LEKREPDFE