Gene Hlac_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1105 
Symbol 
ID7400914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1110911 
End bp1112179 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content71% 
IMG OID643708171 
ProductSaccharopine dehydrogenase 
Protein accessionYP_002565770 
Protein GI222479533 
COG category[S] Function unknown 
COG ID[COG3268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CCGATCGGAC ACACGACATC GTGGTGTGGG GCGCAACGGG CGTCGCCGGA 
CGCTTCGTGG CCGAGTACCT GACCGAACGG TACGCGCCGG ACGACCTCTC GCTGGCTGTC
GGCGGGCGGA GCCCGGAGCG ACTCGAACAA CTCGTTAGTG ACCTTACCGG CCGCAGCGAC
GCGTGGGACG ACGTTCCCGT CGTCGTGGGC GACGCGACTG ATCCCGAAAG TCTGCGCGCC
ATCGCCCGGG ACACGCGGGT CGTCTGTACG ACCGTCGGTC CGTACACGAC GTACGGAACG
CCGCTGGTCG ACGCCTGCGT CGAGGCCGGC ACGGACTACT GCGACCTCAC CGGCGAGATA
AACTGGGTGC GCGAGATCAT CGACCGGTAC CACGAGGCAG CGGTCGACGC CGAAGCTCGG
ATCGTCCACA GCTGCGGTTT CGACTCCGTA CCTGCGGATC TCGGAACGCT GCTCGCCCAG
TCGTTCGCAG TGGAGACGTT CGACGCACCC TGTCAGACGG TTCGGATCTA CCTCGAAGGC
GGGAGCGGCG GTGTCAGCGG GGGCACCTTG GCGAGTTTCG GCGAGGTGTT TGAGGCGGCC
GCCACCGACC CACTGGCCCG CCAGACGCTC CGGAATCCGT ACTCGCTGGC GCCGCCCGGT
GAGCGGAGCG GTGTCGATCC CGGTGAGCAG CGACGCCCGC GGAGGGACTC CCTGCGCTCG
GCGTGGACGG CTCCCTCGCC GATGGCACCG GTAAACGAAC GAGTGGTACG ACGGAGCAAC
GCGCTCCTCG GGTACCCGTG GGGCCGCGAG TTCCGGTGTA CGGAGGTCGT GCCGACCGGC
GACGGACTCA CCGGGGCGGC CACGGCCGGT CTCGTTGCCG TCGGACTCGG TGCGTTCACG
GCCGCCATGT CCGTCGGACC GGTGCGCTCG GCGCTCCGTC GGTACGTCTT CCCGGACCCC
GGCGAGGGAC CGACGAGAGA GGAGGCCGAG GCCGGGCACT TCTCGATTCG CGTGCTCGGG
CGGGGCACGG CCGCGGACGG GCCGTTCACC GTCGAGGTCG AGTTCGGCGC CGATCGGGAC
CCGGGCTACG GGGCGACCGC GCGGATGCTC GGCGAGGCGG CGGTGTGTCT GGCGACCGGC
GACGTCGACT CGCCGCTCGA CGGCGGCGTG CTGACGCCGG CGTCGGGGAT CGGTCTGCCG
CTCGCGGAGC GACTCCGCGA CGTCGGCTTC ACCGTGTCGG TCGGCGAGGC GTCAGATACC
CGACGCTGA
 
Protein sequence
MTDADRTHDI VVWGATGVAG RFVAEYLTER YAPDDLSLAV GGRSPERLEQ LVSDLTGRSD 
AWDDVPVVVG DATDPESLRA IARDTRVVCT TVGPYTTYGT PLVDACVEAG TDYCDLTGEI
NWVREIIDRY HEAAVDAEAR IVHSCGFDSV PADLGTLLAQ SFAVETFDAP CQTVRIYLEG
GSGGVSGGTL ASFGEVFEAA ATDPLARQTL RNPYSLAPPG ERSGVDPGEQ RRPRRDSLRS
AWTAPSPMAP VNERVVRRSN ALLGYPWGRE FRCTEVVPTG DGLTGAATAG LVAVGLGAFT
AAMSVGPVRS ALRRYVFPDP GEGPTREEAE AGHFSIRVLG RGTAADGPFT VEVEFGADRD
PGYGATARML GEAAVCLATG DVDSPLDGGV LTPASGIGLP LAERLRDVGF TVSVGEASDT
RR