Gene Hlac_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1101 
Symbol 
ID7400173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1106363 
End bp1107307 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content66% 
IMG OID643708167 
Productpyruvate carboxyltransferase 
Protein accessionYP_002565766 
Protein GI222479529 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT ACCCCTCGGA CGTGACCCTC GTCGAGATGC TCCCGCGTGA CGGGTTCCAG 
CGACTCGATG AGTTCGTCCC GACCGACGAG AAAGTCGAGA TCATCGACGC GCTCTCCGAG
ACTGGAGTCG ACGAGATCGA GATCACTTCC TTCACCCACC CGAAGGCGGT CCCGACGCTG
CGAGACGCGG ACGAGGTCGC CCAACGCATC GAGCGGCACG ACGACGTGAC GTACCGCGCG
CTGGTGCCGA ACGCGGTCGG GATGGAGCGC GCGATCGACG CCGGCGTCGA CAAGGTCAAC
GCCTTGGTGA CCGTGAGCGA GACGTACAGC GAGCACAACC AGAACATGAC GGTCGAGGAG
ATCCTGACGG GGGTCGAAGA GATCGTCGAG ATGGCCGAGG GAACGGGCAT CGAGGTCGAG
GCCGGGATGG GCACGAGCTT CTACTGTCCG TACGAGGGGC GGATTCCCAT GGAAGACACG
CTGTCGGTCG TCGACCGTGT CGTCGACGCC GGCGTCGACG AGGTGACGCT CGCGACGACG
ATGGGGCTCG CCGACCCGGT CGAGATCGAG GAGATGTACA CGACGGTGTT CGACCGGCAT
CCGGACCTGG ATGCCGGGCT GCACCTCCAC GACACGAACG GGATGAGCCT CGCAAACACC
CTCGTCGCGA TGCAGTGCGG CGTCGACCGG TTCGACGCGT CTCACTGCGG GCTCGGCGGC
GGCGTCGTCC TGCCGGACGG GCTCGGCGGC GTCGGGAACA CCCCGACGGA GGACCTCGTC
CAAATGCTGA CCAGAATGGA TCTTGAAACG AACGCGGACT TCGAGCGCGT CGAGTCGGTC
GCTCACGAGG TCGCCGACCG ACTCGATATC GGGGCGACGA GCCACGTCCT GATGGGCGGG
ACCGTCGACC GCGTGTTAGC GACCGTCGCG GAGGACAACG CATGA
 
Protein sequence
MIEYPSDVTL VEMLPRDGFQ RLDEFVPTDE KVEIIDALSE TGVDEIEITS FTHPKAVPTL 
RDADEVAQRI ERHDDVTYRA LVPNAVGMER AIDAGVDKVN ALVTVSETYS EHNQNMTVEE
ILTGVEEIVE MAEGTGIEVE AGMGTSFYCP YEGRIPMEDT LSVVDRVVDA GVDEVTLATT
MGLADPVEIE EMYTTVFDRH PDLDAGLHLH DTNGMSLANT LVAMQCGVDR FDASHCGLGG
GVVLPDGLGG VGNTPTEDLV QMLTRMDLET NADFERVESV AHEVADRLDI GATSHVLMGG
TVDRVLATVA EDNA