Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1093 |
Symbol | |
ID | 7400165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1097152 |
End bp | 1098819 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643708159 |
Product | ABC transporter related |
Protein accession | YP_002565758 |
Protein GI | 222479521 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.403079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTCGCC CGATCTTAGA GACCGAGGGG CTGACTAAAC GGTTCGGCTC GCTCGTCGCA AACGACAGGC TCTCCGTAAC CGTCGAGGAG GACACGATCC ACGGCATCAT GGGGCCGAAC GGCTCCGGGA AGTCGACGTT TTTCAACACC GTCACCGGGT TCTACCGCCC CGACGGCGGC ACGGTCCGGT TCGACGGAGA GGACGTGACC GGGTGGAAAC CCGACGAAAT CGCCCGACGC GGGCTCGCGC GGACCTTCCA GATCCCGTCG CCGTTCGAGG ACCTCACGGT CAAGGAGAAC ATGCTCGCCG TGTTCACTGG CGGGCTTCGC TCCGGGATGC GGATCTCGGA GGCGAAACGC GCCCGCGCCG ACGAACTGCT CGAACTCCTC GAGATCGACC ACGTCGCCGA TCAGGAGGCC GGCGGGGTCT CGGGCGGGCA GGAGAAACTG CTCGAACTCG GGCGGATCTT GATGCTCGAA CCGGCCTGCG TGATGCTCGA CGAGCCCACA GCGGGGGTCA ATCCCTCGCT CCGGAATCGC CTGCTCGAAC ACTTAGAGAC GCTCAACGAC CGCGGCACGA CGTTCGTGAT CATCGAACAC GACATGCGCG TCATCGCGGA CGTGTGTGAC CGCGTAACCG TGTTCAATCA GGGACAGGTC CTCGTCGAAG GCGACTTCGA GTCGGTGACG AGCGACGAGC GCGTCCGCGA CGCGTACCTC GGCGGCGCCG CCGAGCACGA CGCGTCGCTG GAGACGCTCA TCGGGGAGGA GGCGGATGCC CCGGTCTCCG AGGAGCGTGG CACACCCGCC GACGCCGCGA CGGAACCGAC GCCGACCGCC GGCGGTGGCG GAGCGGTGCC GGCCGACGGC GCGGGCGAGG CGGCCGGGTC CGCGGCGACC GGGGGTGCGG CGAGCGCTAC GTCCGCGCTC TCCGGGATCG GCTCGGAGTC CGACGGGGAG CCGTGGCTCG TCGGCGAGGA CCTCATCAGC GGCTACGGGA ACCACCGGGT CGTCGACGGA ATCTCGATGG AGAGTCGGGA CGGCGTGACC TGCATCTTCG GGCCGAACGG GTCGGGGAAG TCGACGCTTT TGAAGACGCT CGCCGGGGTC GTCCCGGCGT GGGAGGGCCG AGTCACCCAC CGCGGCACCG ACGTGACCCA CAACAGGCCG GCCGAGAACG TCCACCGCGG CGTCACGATG CTCCCGCAGG ACGGCGGGAT TTTCGGCGGC CTCACCGTCC GTGAGAACCT CCTCCTCGGC GGGTACACCG TCGGTGAGGG GGCGGTCCGC GAGGAGCGAC TCGACGAGGT GTTGTCGTCG TTCCCGGAGC TCAAGGACAA ACTGGACGAT CGGGGGCGGT CGCTGTCGGG CGGCCAACAG ATGATGCTCA GCTACGGTCG CGCGATGATG ACCGGCGCGG AGGTGTACCT CCTCGACGAG CCGTCGAGCG GGCTGGCCCC CTCCCTCATC GATCAGGTGT TCGAGATGAC GCGACGGCTC GTCGCCAGCG GCGCGCAGGT GATCCTCATC GAGCAGAACG TCCGCGAGGC GCTTCGGATC GCCGATTACG TCTACATCCT GGCGCAGGGC CAGCTCCAGT TCGAGGGGAC CCCGGCAGAC TTGACCGACG AGGACGACCT CGTCGAACTG TACCTCGGAC TCGACTAA
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Protein sequence | MTRPILETEG LTKRFGSLVA NDRLSVTVEE DTIHGIMGPN GSGKSTFFNT VTGFYRPDGG TVRFDGEDVT GWKPDEIARR GLARTFQIPS PFEDLTVKEN MLAVFTGGLR SGMRISEAKR ARADELLELL EIDHVADQEA GGVSGGQEKL LELGRILMLE PACVMLDEPT AGVNPSLRNR LLEHLETLND RGTTFVIIEH DMRVIADVCD RVTVFNQGQV LVEGDFESVT SDERVRDAYL GGAAEHDASL ETLIGEEADA PVSEERGTPA DAATEPTPTA GGGGAVPADG AGEAAGSAAT GGAASATSAL SGIGSESDGE PWLVGEDLIS GYGNHRVVDG ISMESRDGVT CIFGPNGSGK STLLKTLAGV VPAWEGRVTH RGTDVTHNRP AENVHRGVTM LPQDGGIFGG LTVRENLLLG GYTVGEGAVR EERLDEVLSS FPELKDKLDD RGRSLSGGQQ MMLSYGRAMM TGAEVYLLDE PSSGLAPSLI DQVFEMTRRL VASGAQVILI EQNVREALRI ADYVYILAQG QLQFEGTPAD LTDEDDLVEL YLGLD
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