Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1087 |
Symbol | |
ID | 7400159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1089934 |
End bp | 1090710 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643708153 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002565752 |
Protein GI | 222479515 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCG ACGACACACC GAACACGGCA TCGGTCGGAG CGACAGAACG ATCGTTCCGT ATCATCGAAC AGCTCGGTGA GCGGGAGGGG TGCGGCGTCT CGGAGCTGGC GGAGTCGCTG TCGATCTCGA AGAGCACGGT CCACAACCAC CTCCAGACGC TCCGGGAGCT GGGGTACGTC GTTCAGGACG GCGACGAGTA CCGACTCGGG CTGCAGTTCC TCGGACTGGG AGATCGCGCG CGCCAGCGTC ACGACCTGTA TCACGTTGTC AAGCCCGAGA CGGACAGCCT GGTCGAGGCG GTCGGCGAGC GTGCGCAGGT GATGGTCGAG GAAGGAGGCG TCGGGATCTA CGTCTACCAG TCGCTGGCGG ATCAGGCGGT GCGAACCGAC TCGCACATCG GAACCGTCGT CGACCTCCAC GCGACCTCGG TCGGCAAGGC GTACCTCGCG CACCTTTCCG ACGACCGACT CGACGCGCTG CTTGACCGCG TGGCGTTCGA CGATCAGACG CCCCAGACGC TTACGGACGC CGAGGCGCTG CGGACCGAAC TCGACGAGAT CGCCGAGCGA GGGTACGCGT TCAACGACGA GGAGCGAACC GTCGGGATGC GAGCGGTCGG CGCGCCTATC CTGTCGGCGG ATGACGGGCA CGTCCTCGGC GCGATCAGCG TCTCGGGGCC GACCACCCGG ATGAACGGAA CGTGGTACCA TGAGGAGGTC CCCGAGATGG TCGCGCAGTC CGCCCGGATC ATCGGGATTC GCGCGACGTA CTCGTAG
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Protein sequence | MARDDTPNTA SVGATERSFR IIEQLGEREG CGVSELAESL SISKSTVHNH LQTLRELGYV VQDGDEYRLG LQFLGLGDRA RQRHDLYHVV KPETDSLVEA VGERAQVMVE EGGVGIYVYQ SLADQAVRTD SHIGTVVDLH ATSVGKAYLA HLSDDRLDAL LDRVAFDDQT PQTLTDAEAL RTELDEIAER GYAFNDEERT VGMRAVGAPI LSADDGHVLG AISVSGPTTR MNGTWYHEEV PEMVAQSARI IGIRATYS
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