Gene Hlac_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1087 
Symbol 
ID7400159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1089934 
End bp1090710 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID643708153 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002565752 
Protein GI222479515 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG ACGACACACC GAACACGGCA TCGGTCGGAG CGACAGAACG ATCGTTCCGT 
ATCATCGAAC AGCTCGGTGA GCGGGAGGGG TGCGGCGTCT CGGAGCTGGC GGAGTCGCTG
TCGATCTCGA AGAGCACGGT CCACAACCAC CTCCAGACGC TCCGGGAGCT GGGGTACGTC
GTTCAGGACG GCGACGAGTA CCGACTCGGG CTGCAGTTCC TCGGACTGGG AGATCGCGCG
CGCCAGCGTC ACGACCTGTA TCACGTTGTC AAGCCCGAGA CGGACAGCCT GGTCGAGGCG
GTCGGCGAGC GTGCGCAGGT GATGGTCGAG GAAGGAGGCG TCGGGATCTA CGTCTACCAG
TCGCTGGCGG ATCAGGCGGT GCGAACCGAC TCGCACATCG GAACCGTCGT CGACCTCCAC
GCGACCTCGG TCGGCAAGGC GTACCTCGCG CACCTTTCCG ACGACCGACT CGACGCGCTG
CTTGACCGCG TGGCGTTCGA CGATCAGACG CCCCAGACGC TTACGGACGC CGAGGCGCTG
CGGACCGAAC TCGACGAGAT CGCCGAGCGA GGGTACGCGT TCAACGACGA GGAGCGAACC
GTCGGGATGC GAGCGGTCGG CGCGCCTATC CTGTCGGCGG ATGACGGGCA CGTCCTCGGC
GCGATCAGCG TCTCGGGGCC GACCACCCGG ATGAACGGAA CGTGGTACCA TGAGGAGGTC
CCCGAGATGG TCGCGCAGTC CGCCCGGATC ATCGGGATTC GCGCGACGTA CTCGTAG
 
Protein sequence
MARDDTPNTA SVGATERSFR IIEQLGEREG CGVSELAESL SISKSTVHNH LQTLRELGYV 
VQDGDEYRLG LQFLGLGDRA RQRHDLYHVV KPETDSLVEA VGERAQVMVE EGGVGIYVYQ
SLADQAVRTD SHIGTVVDLH ATSVGKAYLA HLSDDRLDAL LDRVAFDDQT PQTLTDAEAL
RTELDEIAER GYAFNDEERT VGMRAVGAPI LSADDGHVLG AISVSGPTTR MNGTWYHEEV
PEMVAQSARI IGIRATYS