Gene Hlac_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1084 
Symbol 
ID7400156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1083843 
End bp1085171 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content71% 
IMG OID643708150 
Productphosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 
Protein accessionYP_002565749 
Protein GI222479512 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.510755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGAA CGAGCGGTGT CCGAGGTCGC GTTGGAGAGA CGATCACGGC CGACCTCGCG 
CTCGACATTG GACGTGCATT GGTGACCGAC GGCGCCGACA CCGTCGTCCT CGGACGGGAC
GCTCGCGAGA GCGGACGCAC GCTGAGTCGC GCCCTCTCGG CCGGCGTCAC CGAGTGCGGC
GGCGACGTGA TCGACGTGGG CGTCCAGCCG ACACCGACCG TCGCGCGGAG CGTCGTCCGG
GAAGGGGCCG ACGCCGGCGT CGTCGTCACC GCCTCACACA ACCCCGCGCC CGACAACGGG
ATCAAGCTCT GGGCGGCCGA CGGGCGGGCA TTCGACGAAG ACGAAAACGA CAGAATCGCC
GAGATCGTCG AGGAAGCGGC GTTCAACCTC GGCGCGTGGG ACGAACTCGG CGAGCACCGC
CACGTAGACG GCGCACGCGA GCGCCACGAG CGAGCGCTCC GGGAGTCCGT CGCGATCCCG
GACGACCTCT CGGTTGTCGT CGACCTCGGC AACGGCGTGG GACGAGTCAC CGCCGACGCG
CTCCACGCGA CCGGCTGTGA CGTGGAGACG CTCAACGCCC AGCGAGACGG GCGGTTCCCG
GGACGGCCGA GCGAGCCCAC GGCCGAGAAC TGCCAGACGG CCTGCGTGGT CGTCGAGGCC
ACCGACGCGG ACCTCGGGAT CGTTCACGAC GGCGACGCCG ATCGGATGAT GGCGATCGAC
GAGCGCGGCC AGTTCGTCTC CGGCGACGCG CTGCTCGCGC TGTTCGGTCG ACGCGAAGCC
GACGCGGGCG ATCGCGTGGC GGTCCCGGTG GACACGAGCC TCCTCGTCGC GGACACGCTC
GCCGAGGTCG GTGCGGACGT GACGTACACC CCGGTCGGCG ACGCGTACGT CGCCGCTGAG
ACCGCGAACC CCGGCGTCGT GTTCGGCGGC GAACCGAGCG GCGCATGGAT CTGGCCCGAG
CAGACGCGCT GTCCCGACGG CCCCCTCGCC GCCTGCACGC TGGCCGCGCT GGTCGGCGCG
GAGGGATCGC TGTCGGCGAT GGTCGACGGG CTTCCCGCGT ACCCGATTCG GCGGGATTCG
GTGCGGACGG ACGCGAAGGA GGCGGTGGTC GAACACGTCG CCGAACTCGC CCACGAGCGG
TTCGAAACCG TCTCGACGCT CGACGGGATT CGCGTGGAGA CGGACGCGGG CTGGTTCCTC
GTGCGCGCGA GCGGCACCGA GCCGCTAGTG CGGATCACCG CCGAGGCGCG GAACGCGGAC
GATGCAGACG ATCTCTTCGA AACGGCGCGA GACCTCATCG ATCGCGCCGC CGCCGACCGC
AGCCGATAA
 
Protein sequence
MFGTSGVRGR VGETITADLA LDIGRALVTD GADTVVLGRD ARESGRTLSR ALSAGVTECG 
GDVIDVGVQP TPTVARSVVR EGADAGVVVT ASHNPAPDNG IKLWAADGRA FDEDENDRIA
EIVEEAAFNL GAWDELGEHR HVDGARERHE RALRESVAIP DDLSVVVDLG NGVGRVTADA
LHATGCDVET LNAQRDGRFP GRPSEPTAEN CQTACVVVEA TDADLGIVHD GDADRMMAID
ERGQFVSGDA LLALFGRREA DAGDRVAVPV DTSLLVADTL AEVGADVTYT PVGDAYVAAE
TANPGVVFGG EPSGAWIWPE QTRCPDGPLA ACTLAALVGA EGSLSAMVDG LPAYPIRRDS
VRTDAKEAVV EHVAELAHER FETVSTLDGI RVETDAGWFL VRASGTEPLV RITAEARNAD
DADDLFETAR DLIDRAAADR SR