Gene Hlac_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1082 
Symbol 
ID7400154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1082140 
End bp1082583 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID643708148 
Producthypothetical protein 
Protein accessionYP_002565747 
Protein GI222479510 
COG category[R] General function prediction only 
COG ID[COG2402] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.461087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTT TCGTCGACAC CGGAGTGTTC TACGCGCATC ACGATACGGA TGCCAGTCGC 
CACGAGGCCG GGGCAGCGGC GCTGAACGCC GTTCTCAGAT CGGCTGAGTA CGGTCACGTA
ATGACGAGCG ACTACATCTA CGACGAGTCG GTGACGCTGA CACACAGGCG AACGAGGGAC
ATCGACGCCG GGCTCGAGAT CGGACGGCGA ATTCGGGGAG AGGGGTATCC GTCGGCTATC
GAACTCCTCC ACTCGTCCGA GACGCTCTTC GATCGTGCCG TGACGATACA GGAGACGTAC
GCCAAACATC AGCTGAGTTT CACCGACGCG ATGACCGTCG CTCACGTCGA ACACCACGAT
ATCGACTGTG TGTTGAGTTT CGACGACGAT TTCGACGGTG TCGTTACGCG TCTTGTGCCC
GAGACGCTCT TTTCGAGAGA CTGA
 
Protein sequence
MSVFVDTGVF YAHHDTDASR HEAGAAALNA VLRSAEYGHV MTSDYIYDES VTLTHRRTRD 
IDAGLEIGRR IRGEGYPSAI ELLHSSETLF DRAVTIQETY AKHQLSFTDA MTVAHVEHHD
IDCVLSFDDD FDGVVTRLVP ETLFSRD