Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1070 |
Symbol | |
ID | 7400142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1069953 |
End bp | 1070777 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643708137 |
Product | Methionyl-tRNA formyltransferase-like protein |
Protein accession | YP_002565736 |
Protein GI | 222479499 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.520148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCACT CGCTGGCGCT CCTGCTGGGC AGTCGGCAGG TGCCACGGTG GGTAGCAGAC ACACTCACTC GCGCCGAGCG AGACGAGCAC GGGACTATCG AACGAGTGCT GGTTCCTGAA CAGTCCTCGC CAGCGGCACC GGAGAAGGAT ATCCGCTTTT ATTTGGATCA GGTGCGATCG AAGGGGTGTT GGACAGCAGT CGCGGCGGGT CAAAAACTCG GCGAGACCAT GCTGGGCCCG TTGTCTGCTC TGGAACGCGT CCCACTCTCG ACCACCGCAC CCGTCAACGA GGAACTCATC GAGAGCTGCA GGCTCGAACG GTCCTCCGAA TACCGCTACG AACTCCCCGA GTCGGCCGTC GACGCGCTCA CCGAGTCAGA TGTAGCGTTC CACTGGGGCA TCGGCATTCT CAGCGGTGAC GTTCTCTCCG CCCCGGAACA CGGCGTCTGG GGTGTCCATC AGGGGAATAT TCGAAAATAT CGAGGCGGAC CGCCCGGTTT CTGGGAGTAC CTCCACGGCG ACGAGCGGGC CGGCGTGACG CTCCAGCGAT ACACCGAAGA TCTAGACGCC GGCGGCATCG TGGCCGAGAG AACGGTCGAT ATCGGTGATG CGTACACCTG GCGGTCGGTT CGTCACCACC TCTGTGCAGC CAGTTCTGAA CTGCTGGCGG ACGGACTCTG CAATCTCGAC GAGGGAACTC TCGACGTCGA GTCCCCCGAC CGTTTGGGAC CAGTGTACCG TCCCGGTCAA CGGACGTGCA TGATGACGAT GCGCTACCTC GGCCGAACCA TCCCCGGTTG GGTTCGGGAA GCAACGGACC TGTGA
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Protein sequence | MSHSLALLLG SRQVPRWVAD TLTRAERDEH GTIERVLVPE QSSPAAPEKD IRFYLDQVRS KGCWTAVAAG QKLGETMLGP LSALERVPLS TTAPVNEELI ESCRLERSSE YRYELPESAV DALTESDVAF HWGIGILSGD VLSAPEHGVW GVHQGNIRKY RGGPPGFWEY LHGDERAGVT LQRYTEDLDA GGIVAERTVD IGDAYTWRSV RHHLCAASSE LLADGLCNLD EGTLDVESPD RLGPVYRPGQ RTCMMTMRYL GRTIPGWVRE ATDL
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