Gene Hlac_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1070 
Symbol 
ID7400142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1069953 
End bp1070777 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID643708137 
ProductMethionyl-tRNA formyltransferase-like protein 
Protein accessionYP_002565736 
Protein GI222479499 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.520148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACT CGCTGGCGCT CCTGCTGGGC AGTCGGCAGG TGCCACGGTG GGTAGCAGAC 
ACACTCACTC GCGCCGAGCG AGACGAGCAC GGGACTATCG AACGAGTGCT GGTTCCTGAA
CAGTCCTCGC CAGCGGCACC GGAGAAGGAT ATCCGCTTTT ATTTGGATCA GGTGCGATCG
AAGGGGTGTT GGACAGCAGT CGCGGCGGGT CAAAAACTCG GCGAGACCAT GCTGGGCCCG
TTGTCTGCTC TGGAACGCGT CCCACTCTCG ACCACCGCAC CCGTCAACGA GGAACTCATC
GAGAGCTGCA GGCTCGAACG GTCCTCCGAA TACCGCTACG AACTCCCCGA GTCGGCCGTC
GACGCGCTCA CCGAGTCAGA TGTAGCGTTC CACTGGGGCA TCGGCATTCT CAGCGGTGAC
GTTCTCTCCG CCCCGGAACA CGGCGTCTGG GGTGTCCATC AGGGGAATAT TCGAAAATAT
CGAGGCGGAC CGCCCGGTTT CTGGGAGTAC CTCCACGGCG ACGAGCGGGC CGGCGTGACG
CTCCAGCGAT ACACCGAAGA TCTAGACGCC GGCGGCATCG TGGCCGAGAG AACGGTCGAT
ATCGGTGATG CGTACACCTG GCGGTCGGTT CGTCACCACC TCTGTGCAGC CAGTTCTGAA
CTGCTGGCGG ACGGACTCTG CAATCTCGAC GAGGGAACTC TCGACGTCGA GTCCCCCGAC
CGTTTGGGAC CAGTGTACCG TCCCGGTCAA CGGACGTGCA TGATGACGAT GCGCTACCTC
GGCCGAACCA TCCCCGGTTG GGTTCGGGAA GCAACGGACC TGTGA
 
Protein sequence
MSHSLALLLG SRQVPRWVAD TLTRAERDEH GTIERVLVPE QSSPAAPEKD IRFYLDQVRS 
KGCWTAVAAG QKLGETMLGP LSALERVPLS TTAPVNEELI ESCRLERSSE YRYELPESAV
DALTESDVAF HWGIGILSGD VLSAPEHGVW GVHQGNIRKY RGGPPGFWEY LHGDERAGVT
LQRYTEDLDA GGIVAERTVD IGDAYTWRSV RHHLCAASSE LLADGLCNLD EGTLDVESPD
RLGPVYRPGQ RTCMMTMRYL GRTIPGWVRE ATDL