| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1069 |
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| Symbol | |
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| ID | 7400141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1068368 |
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| End bp | 1069906 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643708136 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002565735 |
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| Protein GI | 222479498 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.544527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGA AACAGAATTC AATCATCCGT CGACTGTTCA AGAGCGGGCT CCTGCTGTTC
GCCGGTCTCG TGCTTGAACT CGGGATCTCC TTTGCAGCCA AAATACTCAT CGCCAGACTG
CTTGGTCGTC CGGCATACGG CGTCGCGACC ATCGGCATTA CGACGCTGTC TTTCGCTTCC
ACGATTCTGC TGTTCGGGAT GAATACCGGC GTCGGCCGCT ACCTGCCGCG CTTCGACGAC
GAGGCCGACC GCAAGGGCAT CATGGCGTCC GGTCTGCAGG TCGTGATAGG TTTCTCCGTC
AGTTGCGCCG TTCTTCTGTT CATTTTTGCC GAACCGTTCG CGACGCGGGT TTTAGGCGCG
CCAGAGGCCG TCGTCGTGGT GCGCATCGCG TCGCTCGGCA TCCCCTTCGC GGTGGTGATG
AAATTCACTA TCGGCGTCGT GCAAGGACTC CAGCGGTCGC TCCCGAAGGT GCTCATCAGG
AACATCGGCC AGCCAATCGT CAGGTTCTCG CTGGTCGTCG TCTCGCTCTA CTTCGGCCTC
GGTGCCGCGG GCATCGTTGG GGCCTATTCG GCGACGTTCG CCGCCGCCGG TCTGGCGGGG
CTTTACTACG TTCTCACGCG GACGAACCTT CGGTCCTCCG TCACCGCGAA CATGCGACAG
CGAGAACTCG TCAGGTTCTC TGCACCGCTG ATGCTCACCG CTGCGATGCT GATGGTCCTC
TCGTATTTCG ACATCTTCAT GCTGAGTTAC TTCCGGACAT CCGGGGAAGT CGGGAGCTAC
AACGTGGTGT ATCCGCTTGC GGAACTGCTG ACAGCGACGC TCTCGGCATT CAGCTTTATC
GCGATGCCCA TCCTCTCGCA GTTGCATTCC GACGAGCGGA TCACTGAAAT GGACCGCACG
TACAAGGTCG TCACCAAGTG GATATTCATG GCTACGCTGC CGCCTATGCT CATCCTCATT
TTCTTCCCGA CGGCGTCGAT TCGGATGACG TTTGGACCGG AGTACACGGA TGGGTCGCTG
GCACTCGTGA CGCTCGCGCT CGGGTTCTTC ACGCACTCCG TGGCCGGCCC AAACGTGAAC
ACGCTCACGG CAATCGGGCG GACGCGAATC ATCATGTGGG ATAATCTCCT CGCGGGCGTG
ACCAACATCG CGCTCAACTT TGCGCTCATC CCGGAGTACG GTATCCTCGG CGCGGCAGTG
GCGACTGCCG TCTCCTACGC AGGGCTGAAC GTCCTCTACT CGGCTCAGCT CTACCGGCAA
ACAGGCATCC ATCCGATGAC AGCAGCGTTG TTCAAACCCG CAATCGCCGG CACCTTGTCA
ATGGTGGGTA TCTACTACGT CGTCACACGA TTTCTCGATA CGACGGCGCC GGTGTTGGTC
GGCATGGGTA TCGTGTTCGT GAGTCTCTAC AGCATCGCGA TTCTGGCACT CGGCGGCATT
GAGGAGGAAG AAATTATGCT CGTGCTGAGC TTTGAGGAGC GGTTCGGCGT GGACCTCGGA
CCGTTCAAGC GCGTCGCCCG GTTCTTCGTG GACGAGTAA
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| Protein sequence | MFEKQNSIIR RLFKSGLLLF AGLVLELGIS FAAKILIARL LGRPAYGVAT IGITTLSFAS
TILLFGMNTG VGRYLPRFDD EADRKGIMAS GLQVVIGFSV SCAVLLFIFA EPFATRVLGA
PEAVVVVRIA SLGIPFAVVM KFTIGVVQGL QRSLPKVLIR NIGQPIVRFS LVVVSLYFGL
GAAGIVGAYS ATFAAAGLAG LYYVLTRTNL RSSVTANMRQ RELVRFSAPL MLTAAMLMVL
SYFDIFMLSY FRTSGEVGSY NVVYPLAELL TATLSAFSFI AMPILSQLHS DERITEMDRT
YKVVTKWIFM ATLPPMLILI FFPTASIRMT FGPEYTDGSL ALVTLALGFF THSVAGPNVN
TLTAIGRTRI IMWDNLLAGV TNIALNFALI PEYGILGAAV ATAVSYAGLN VLYSAQLYRQ
TGIHPMTAAL FKPAIAGTLS MVGIYYVVTR FLDTTAPVLV GMGIVFVSLY SIAILALGGI
EEEEIMLVLS FEERFGVDLG PFKRVARFFV DE
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