Gene Hlac_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1063 
Symbol 
ID7400135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1061924 
End bp1062847 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content62% 
IMG OID643708131 
Productglycosyl transferase family 2 
Protein accessionYP_002565730 
Protein GI222479493 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.991977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTCT CGGTCGTCGT CTGTACGTAC ACGCTCGACA TGTACGAGCA CTTCCGCGAG 
GCCGCCGACA GCGTCCTCGC GCAGACGCAC GACGACGTCG AGCTCGTCGT GGTCGTCGAC
GGAACGCCCG AGGTGTACGA GCAGGTCGTC GACGACTACG GCGACCGCGA GGACGTGGTC
ATCGAGTGCA ACGACGAGAA CGTGGGGTTG TTGGAGAGTC GGAACCGGGG TGCAGCAATC
GCGTCCGGTG ACGTGGTCGC GTTTATCGAC GACGACGCGA TCGCCGACGA GGCGTGGGTC
GAGCGGCTGG TCCGCGCCTA TGAAGAGGAG GACGCGATCG CGGCCGGCGG GAAGATGACG
CCCGCGTGGG TCGCCGGCAA GCCGTCGTTT CTCCCCGAGG AGTTCTACTG GCTGATCGGC
GTGACGCATC GCGGATTCGC CGACGGGCCA GGCGAGGTGC GGAACACGTT CGGATCGAAC
ATCTCGTTCC GGGCGGACGT GTTCGAGGTG TTGGGCGGGT TCGACGTCGA TATCGGCGGG
CGGAAGGGCG ACAAGAACCT GCAGGGTGGA GAGACAGAGC TGTGTGCGCG GATGCGAGAG
GAGTACGGAG GGGGAGTGTG GTACGATCCC GAGGCAGAGG TGGCACACAA GGTGTTCGAG
TACCGGACGG AGTTCCGGTG GCTGGTGGAT CGGGCATTCT GGCAGGGGTA CTCGAAGCGG
GCGATGGAGT CGTTCGTTGA GGATGAGGGT GGTGAAGAGG GGGCGTTTCT TAAATACATT
CTCACGAATA CAACCCCTCG GCGAGTAAAA CGCCTCGTGT CGAGAGAGCC GCTCACGGAG
ATCAAACTGT TCGTTATGGT CTACCTGCTT ACTGGTTTGG TCGGGTTCGG ATATCTCTAC
GGTACACTCA CTTACTCAGC ATAA
 
Protein sequence
MKVSVVVCTY TLDMYEHFRE AADSVLAQTH DDVELVVVVD GTPEVYEQVV DDYGDREDVV 
IECNDENVGL LESRNRGAAI ASGDVVAFID DDAIADEAWV ERLVRAYEEE DAIAAGGKMT
PAWVAGKPSF LPEEFYWLIG VTHRGFADGP GEVRNTFGSN ISFRADVFEV LGGFDVDIGG
RKGDKNLQGG ETELCARMRE EYGGGVWYDP EAEVAHKVFE YRTEFRWLVD RAFWQGYSKR
AMESFVEDEG GEEGAFLKYI LTNTTPRRVK RLVSREPLTE IKLFVMVYLL TGLVGFGYLY
GTLTYSA