| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1062 |
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| Symbol | |
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| ID | 7400134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1058680 |
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| End bp | 1061826 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643708130 |
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| Product | Oligosaccharyl transferase STT3 subunit |
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| Protein accession | YP_002565729 |
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| Protein GI | 222479492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT CGAGCGATCC ACCGGCGGCG TCGGATCGGT CCTCCGCCGA CCTCCTCGCA
CGGTGGTACC ACGTCCCGGT TCTTCTCGGC GTACTGGCCT TCATGCTCTG GACCCGCCTC
CAGTCGTACG GGAACTTCGT CCAGAACGGC GAGGTGTACT TCCGCGGCAA CGACCCGTGG
TACCACTTCC GCGAAACGAT GTACATCATG GAGAACTACC CGAATCGGAT GCCCTTCGAC
GTCTGGACCG GGTTCCCGCT CGGGAACCAG GCCGGCCAGT TCGGCACACT CTGGGACCAC
ATCATGGCGG TCGGCATCTG GATCGCTCGC CCGATCATGG GCAGCGCCGA GGAGGTCATG
CTCATCATGG CCCCCATCGC GGGGATGCTC GTTGCGATCC CGACGTACTT CATCGCACGT
CGGTTCGTCG ATCGCTTCGC GGCGCTCGCC GCGGTCGTCG TGCTCGCGCT CCTGCCGGGG
ACCTTCTTCA GCTACAGTCT CGTCGGCTTC CCGGACCACA GTGCGGCCGA AGTGCTCTTC
CAGAGTCTCG CCATCCTCGC GTTCCTCGTC GCCGTCGCGG TCGCCGAGCG CGAGGCACCC
GTCTGGGAGC TCGTCGTCGA CCGCGACTGG GCCGCACTCA AGCGTCCCGC CGCGTACGCG
GCCGCCGCGG GCGTCGCGCT CGGTCTCTAC ATGTGGACGT GGCAGCCGGG AGCCCTCATG
GTCGGGTTCA CCGGAGTCTT CCTCGCGATC AAGATCACCA GCGACGTGTC CCACGGGAAG
AGCCCGGAGC CCATCGCCTT CGCGGGCGCG GTGTCGATGG TCGTCGCCGG ACTGATGCAG
ATCGTCCCGC TCGACACGTT CCGGTTCGCT GTGAGCGAGT ACTCGTTCCT CCAGATCGTC
TCCCCGCTCG GCGTCGCGCT CGGCGCGGTC TTCCTCGCGT GGCTCGCCCG CCAGTGGGAG
TCGCGCGACC TCGACGCAGC CACCTACCCG CCCGCGGTCG GCGGCCTCAT TCTCGCGTCC
GCGGGCGTCG TCTGGCTCGC GATCCCCTCG CTGTGGTCGA CGCTCACCGG CAGCCTCCTC
AACACCGTCG GCTTCTCGGC CAGCGCCGGC GCTCGCACCA TCGGTGAGGC CCAGCCGCCC
CTCCAGGACG CCTCCCTCGC CGACTTCGTC CTCGGCCAGT ACGGCCTCGC GTTCTTCCTC
GCGCTCGCCG CTGTTCTCTA CATCCTCGCG CGTCCCCTCT ACCGTTCCGA CGACGCGAAC
CACACGCTCT ACATCCCGGC CGCACTCGCC GTGGTCGGCT CCGTCTACGC GGTCCCCCAG
CTCTACGACG CCATCGGCGG CGTCGTCGGC GTGAGCTGGC AGGTGATCGG ACTCCTCATC
GCGGCCGCCT TGCTCGTCGG CGCGACGTTC CTCGTCGAGT ACGACGCCGA GGAGCTGTAC
TTCGTCGTGT GGGCGGCGTT CATCGGGAGC GCCGCGTTCA CCCAAGTTCG CTTCAACTAC
TACCTCGCGG TGATCGTCGC GGTCGGCGCG GCCTACTTCG TGCAGCTGGC CGTCGACTTC
CTCCGCCTGC GCTCGCTCTC GGGCGTTCGC GACGTCGAGG GGTGGCAGGC GATGGGCGCG
CTCGTCCTCG TCGTCATCGT CCTCGTCCCG CTCGTCGCGA TGGCGACGCC GGTGTGGGCC
GCGGGCGCGA ACACCGGCCC CGGCAGCGTC ACGCAGTGGG ACGGGAGCCT CCAGTGGATG
AACGACGAGA CGCCCACGCC GGGCGAGCTC GAAGGCGCCG ACAACCCCAT GGAGCTGTAC
GGCACCTACG AGCGCCCCGC CGACGGCGAC TTCGAGTACC CGGAGGGCGC GTACGGCGTG
CAGTCGTGGT GGGACTACGG CCACTGGATC ACCACGCGCG CCGAGCGCAT CCCGAACGCG
AACCCGTTCC AGCAGAACGC GGGCGAAGCG GCTGACTACC TCCTGGCACC GAGCGAAGAG
GCGTCCCGCG AGGTGCTCGC GAGCCAGAGC ACGGAGGGCG AGAACACCCG CTACGTGATG
GTGGACTCGC AGATGGCCTC GCCGAACTCC AAGTTCGGCG CGCCCGTCAC GTTCTACTCG
GGCAACGAGA CGCGCGACGA CTTCAACCGC GTCCTCTATC AGCAGACCGA GCAGGGCGGG
TTCCAGACGG TGATGCAGGT GAACACGCAG CGCTACCACG AGAGCCAGAT GATTCGGCTG
TACGAGCACT ACGGCAGCGC GGTCGACCCC GCACCGGTCG TCGTCGACTG GGAGACGCAG
AGCGCCCAGA CCGGGAGCGG CGAGCAGATC GAGATTAACA CCCTCCCGAG CGATCCGGGA
GCGACGATCC GACAGTTCGA CAACGTCTCG GCCGCCCGCG CGTACGTCGA GGAAGACGGC
AGCGCGCAGC TCGGCGGCGT CGGCGACCTC CCCTCGGAGC GCGTCGAAGC CCTCGAACAC
CACCGGCTCG TCCACACATC GCAGGCGGCA GGGCAGTCGC CCTCGGCGAG ACAGGTGCAG
ATCCTGCAGC AGCTCGGCGT CGACGTGCAG AGCGTCCTCG GCGAGTCGAC CCTGCAGGCG
TTCCAAGACG ACTTCGTGAA GACGTTCGAA CGCGTTCCCG GCGCGACGAT CGAAGGCTCG
GGCGCGGCGC CCGGCCAAGA GGTCGAAGCG ACCGTGGAGC TGGAGAAGTC CACGGGACAG
ACCTTCGAGT ACACCCAGTA CGCCGAGGCC GACGAGAACG GGAACTTCGA GCTCACGGTC
CCGTACTCGA CGACGGGCTA CGACGAGTTC GGTCCCGAGA ACGGCTACAC GAACACGAGC
GTCCGCGCCA CTGGCCCCTA CAACGTCACC ACAGAGGCGA CCACCGACGA CGACCTCACC
ACGACACAGC GCGTCGGGCA GGTCGAGGTG ACCGAGGGGC AGGTCGTCGG CGCGGACGAC
GCGGCGGCGA CGGTCGACCT CACCGAGGAG GTCATCGACT GCCCGAGCGG CGACCCGGAC
TGTTCGGTCG AGCAGAGCGA CAAGGGCAGT GACGGGTCCG ACGGAAGCGA CGGCAGCGAC
GACGGCAACA CCACCAACGC GGTCGACGGC GCGATGACAC TGGTCGCGAC CGAGTCGGCC
GCGACGATGA CGCCCGTCGC CGCCTGA
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| Protein sequence | MSDSSDPPAA SDRSSADLLA RWYHVPVLLG VLAFMLWTRL QSYGNFVQNG EVYFRGNDPW
YHFRETMYIM ENYPNRMPFD VWTGFPLGNQ AGQFGTLWDH IMAVGIWIAR PIMGSAEEVM
LIMAPIAGML VAIPTYFIAR RFVDRFAALA AVVVLALLPG TFFSYSLVGF PDHSAAEVLF
QSLAILAFLV AVAVAEREAP VWELVVDRDW AALKRPAAYA AAAGVALGLY MWTWQPGALM
VGFTGVFLAI KITSDVSHGK SPEPIAFAGA VSMVVAGLMQ IVPLDTFRFA VSEYSFLQIV
SPLGVALGAV FLAWLARQWE SRDLDAATYP PAVGGLILAS AGVVWLAIPS LWSTLTGSLL
NTVGFSASAG ARTIGEAQPP LQDASLADFV LGQYGLAFFL ALAAVLYILA RPLYRSDDAN
HTLYIPAALA VVGSVYAVPQ LYDAIGGVVG VSWQVIGLLI AAALLVGATF LVEYDAEELY
FVVWAAFIGS AAFTQVRFNY YLAVIVAVGA AYFVQLAVDF LRLRSLSGVR DVEGWQAMGA
LVLVVIVLVP LVAMATPVWA AGANTGPGSV TQWDGSLQWM NDETPTPGEL EGADNPMELY
GTYERPADGD FEYPEGAYGV QSWWDYGHWI TTRAERIPNA NPFQQNAGEA ADYLLAPSEE
ASREVLASQS TEGENTRYVM VDSQMASPNS KFGAPVTFYS GNETRDDFNR VLYQQTEQGG
FQTVMQVNTQ RYHESQMIRL YEHYGSAVDP APVVVDWETQ SAQTGSGEQI EINTLPSDPG
ATIRQFDNVS AARAYVEEDG SAQLGGVGDL PSERVEALEH HRLVHTSQAA GQSPSARQVQ
ILQQLGVDVQ SVLGESTLQA FQDDFVKTFE RVPGATIEGS GAAPGQEVEA TVELEKSTGQ
TFEYTQYAEA DENGNFELTV PYSTTGYDEF GPENGYTNTS VRATGPYNVT TEATTDDDLT
TTQRVGQVEV TEGQVVGADD AAATVDLTEE VIDCPSGDPD CSVEQSDKGS DGSDGSDGSD
DGNTTNAVDG AMTLVATESA ATMTPVAA
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