Gene Hlac_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1046 
Symbol 
ID7400118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1037875 
End bp1039023 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content66% 
IMG OID643708114 
ProductLuciferase-like monooxygenase 
Protein accessionYP_002565713 
Protein GI222479476 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.974969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG AATTCGCGTA CTGGGTGCCG AACGTCAGCG GCGGGCTGGT CGTCTCCGAC 
TGGGAGACGG AGACGGACTG GACGTACGAC TACAACCTCG ACCTCGCCCG CACGGCGGAG
TCGGTCGGGT TCGACTACGC GCTGGCACAG GCGCGCTTCT TCGGCAGCTA CGGGGCGGAC
AAACAGCTAG AGGCGCTGTC GATCGCCAAC GCGCTCGCCG CACAGACCGA CGAGCTACAC
GTGATCGGCG CGGTCCACCC CGGGCTGTGG GAGCCCGGCC CGCTGGCGAA CTTCATCGCC
ACGTCCGACC GCATCAGCAA CGGACGGTTC TCGATCAACA TCGTCTCCGG CTGGTTTAAA
GGGGAGTTCA CCGGATTCGG CCAGCCGTGG CTCGAACACG ACGAGCGGTA CGCCCGCTCG
TCGGAGTTCA TCGAGGTGCT GAAAGCGCTG TGGACTGAGG AGCGCGCGAC CTACGACGGC
CGGTTCTACA CGATCGGGAA GGACATCGAG GGGTTCGAGG GCGCGCCGCT GGAGCCCAAA
CCGGTGCAGG ATCCGTACCC ACAGGTGTTC CAAGGCGGGA ACTCGCAGGC GGCTCGGGAG
ATGGCCGCGA AACACTCGGA TGTGCTCTTC ATCAACGGCG GGAGCCTCCA AGAGATCCGC
GCCGTCATCG ACGACGTCGA GGAGTACGCC GAGGAGTTCG GCACGGAGCC GCCGCGGTTC
GCCGCGAACG CGTTCGTCAT CCAGCGCGAC ACCGAGTCGG AGGCCAAGGA GGTCCTGGAG
GGGATCATCG AGAACGCCAC CGACGAGGCG GTCGACGCGT TCAAAGACCA GGTGAAGGAG
GCCGGCCAGT CGTCGGGCGA GGGCGAGGGG ATGTGGGCCG ACTCCGACTT CGAGGACCTC
GTGCAATACA ACGACGGCTT CAAGACCGGA CTCATCGGGA CCGACGACCA GATCGTCGAG
CGGATCCGGA AGCTGGATGC GATCGGCGTC GACATCGTCC TCGCGGGCTT CCTCGACTTC
GAGGCGGAGC TCGAACGCTT CGGTGAGACG ATCATCCCGG CGATCGACGA GGCCGACTCC
CTCGACCCCG ACGAGGTCGA CGCGGTCGAC GAGATCGAGG AAGTCGGCGG CGCGAAGGTG
GCCCGATAG
 
Protein sequence
MDTEFAYWVP NVSGGLVVSD WETETDWTYD YNLDLARTAE SVGFDYALAQ ARFFGSYGAD 
KQLEALSIAN ALAAQTDELH VIGAVHPGLW EPGPLANFIA TSDRISNGRF SINIVSGWFK
GEFTGFGQPW LEHDERYARS SEFIEVLKAL WTEERATYDG RFYTIGKDIE GFEGAPLEPK
PVQDPYPQVF QGGNSQAARE MAAKHSDVLF INGGSLQEIR AVIDDVEEYA EEFGTEPPRF
AANAFVIQRD TESEAKEVLE GIIENATDEA VDAFKDQVKE AGQSSGEGEG MWADSDFEDL
VQYNDGFKTG LIGTDDQIVE RIRKLDAIGV DIVLAGFLDF EAELERFGET IIPAIDEADS
LDPDEVDAVD EIEEVGGAKV AR