| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1042 |
|---|
| Symbol | |
|---|
| ID | 7400113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1035022 |
|---|
| End bp | 1035660 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643708109 |
|---|
| Product | fibrillarin |
|---|
| Protein accession | YP_002565709 |
|---|
| Protein GI | 222479472 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1889] Fibrillarin-like rRNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC CCAATCTCCC TGCGGGCGTC GAGCGCCGCG AGATCGGCGG AGAGACGCGG
CTGGCGACTC GCGGTCCGCC GGTGTACGGC GAGCCGACCG CGGACGGCTG GCGCGCGTGG
GATCCCGGCC GCTCGAAGCT CGGCGGAATG TTCGAACTCG GGTTCGAGAC GGGGTTGTCC
GGCGGCGAGA CGGTGTTGTA CCTCGGCGCG GCCAGCGGAA CGACCGTCAG CCACGTCGCG
GACTTCGCGG GGCCGACGTA CGCGGTGGAG TTCGCGCCGC GGCCGGCGCG GGACCTCGTT
GAGGCGGCTG AGCCCCGCGA TAGGCTGTTC CCGCTTTTAA AGGACGCACG GACGCCGAAA
CGCTACGCGC ACGTCGTCGA GAGCGACGTG GACGCGATCG TGCAGGACGT GGCGACGCGC
GGGCAAGCGG AGGTCGCCGT ACGCAACGCG CGGTTCCTCG CGGACGACGG GCGGCTGCTG
CTCGCGATCA AGGCGCGCAG CGAGGACGTG ACGGTGGAGC CGGAGACGGT GTTCGAGGGC
GCGCTCGACC GGCTTCGGGA GACCTACGAG ATTCTGGAGA CGCAACGGCT CGACCGGTTC
CACGAGGACC ACCTCGGCGT CGTGGCGACG CCGAAGTGA
|
|---|
| Protein sequence | MSEPNLPAGV ERREIGGETR LATRGPPVYG EPTADGWRAW DPGRSKLGGM FELGFETGLS
GGETVLYLGA ASGTTVSHVA DFAGPTYAVE FAPRPARDLV EAAEPRDRLF PLLKDARTPK
RYAHVVESDV DAIVQDVATR GQAEVAVRNA RFLADDGRLL LAIKARSEDV TVEPETVFEG
ALDRLRETYE ILETQRLDRF HEDHLGVVAT PK
|
|---|
| |