Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1036 |
Symbol | |
ID | 7400107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1028906 |
End bp | 1029742 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708103 |
Product | protein of unknown function DUF62 |
Protein accession | YP_002565703 |
Protein GI | 222479466 |
COG category | [S] Function unknown |
COG ID | [COG1912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACGC TCGCCTCCGA CTTCGGCTCG CCGTACCCCG CCGCGATGAA GGGAGTAATT CGCCGCCACA CCGACGCCGA ACTGATCGAT GTCGCCCACG ATCTGCCCCG CGGTGACCCC CGAGCGGCCG CCTTCTGGCT CCGCTTCGTG CTCCCGGAGT TCCCGCCGGC CGTCCACTGT GCGGTGATCG ATCCCGGCGT CGGCACCGAC CGAGACGCAC TCGTCGTCCG CGCCGGCTCG CACGTGCTCG TCGCCCCCGA CAACGGACTC GCGATGCCAC CGGCCCGAGC GCTCGCGAGG GAGAAAGAGC AGGATGAGAA TATCGAAGCG TTCGTCGTCG ACGTAGGAGA GCCCGCGAGC GAGACGTTCC ACGGCCGCGA CGTGTTCGCG CCGACCGCGG CCCGGATCCG GACGGCGCTC GACGACAACC CCGCGAAAGC CACGCCCGAG GCGGTCTCGG AGACGCTCGC CGCCATGGAC GACCTCTCAC CGGCGACGGA TCCGGTCGAC CTCGTCCTTC CAGACCCGAG TGTCGAACGC GACGACGCGG GCGACCCGGT CGCTGTCGAT GGTGAGGTGC TCGCGATCGA CCGGTTCGGC AACGTCGTCA CGAACGTCCC GGGCGAGCTG ATCCGCGGCC GCGACTGGGT CCGGATCAAC GGGGAGCTCA CCCCGGTCGC CGAGACGTTC GGCGCGGTCG ATTCGGGCGA TCGGCTCGTC ACCGTCGGGA GTCACGGCTA CGTCGAGTGC GACGTGAACG ACGGGCGCGG CGACGGCGCG TTCGACCTCC GACCCGGGGA GTCGGTACGG CTCGTCGCCG ACAACGTGAG TTTGTAG
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Protein sequence | MITLASDFGS PYPAAMKGVI RRHTDAELID VAHDLPRGDP RAAAFWLRFV LPEFPPAVHC AVIDPGVGTD RDALVVRAGS HVLVAPDNGL AMPPARALAR EKEQDENIEA FVVDVGEPAS ETFHGRDVFA PTAARIRTAL DDNPAKATPE AVSETLAAMD DLSPATDPVD LVLPDPSVER DDAGDPVAVD GEVLAIDRFG NVVTNVPGEL IRGRDWVRIN GELTPVAETF GAVDSGDRLV TVGSHGYVEC DVNDGRGDGA FDLRPGESVR LVADNVSL
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