Gene Hlac_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1036 
Symbol 
ID7400107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1028906 
End bp1029742 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content70% 
IMG OID643708103 
Productprotein of unknown function DUF62 
Protein accessionYP_002565703 
Protein GI222479466 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGC TCGCCTCCGA CTTCGGCTCG CCGTACCCCG CCGCGATGAA GGGAGTAATT 
CGCCGCCACA CCGACGCCGA ACTGATCGAT GTCGCCCACG ATCTGCCCCG CGGTGACCCC
CGAGCGGCCG CCTTCTGGCT CCGCTTCGTG CTCCCGGAGT TCCCGCCGGC CGTCCACTGT
GCGGTGATCG ATCCCGGCGT CGGCACCGAC CGAGACGCAC TCGTCGTCCG CGCCGGCTCG
CACGTGCTCG TCGCCCCCGA CAACGGACTC GCGATGCCAC CGGCCCGAGC GCTCGCGAGG
GAGAAAGAGC AGGATGAGAA TATCGAAGCG TTCGTCGTCG ACGTAGGAGA GCCCGCGAGC
GAGACGTTCC ACGGCCGCGA CGTGTTCGCG CCGACCGCGG CCCGGATCCG GACGGCGCTC
GACGACAACC CCGCGAAAGC CACGCCCGAG GCGGTCTCGG AGACGCTCGC CGCCATGGAC
GACCTCTCAC CGGCGACGGA TCCGGTCGAC CTCGTCCTTC CAGACCCGAG TGTCGAACGC
GACGACGCGG GCGACCCGGT CGCTGTCGAT GGTGAGGTGC TCGCGATCGA CCGGTTCGGC
AACGTCGTCA CGAACGTCCC GGGCGAGCTG ATCCGCGGCC GCGACTGGGT CCGGATCAAC
GGGGAGCTCA CCCCGGTCGC CGAGACGTTC GGCGCGGTCG ATTCGGGCGA TCGGCTCGTC
ACCGTCGGGA GTCACGGCTA CGTCGAGTGC GACGTGAACG ACGGGCGCGG CGACGGCGCG
TTCGACCTCC GACCCGGGGA GTCGGTACGG CTCGTCGCCG ACAACGTGAG TTTGTAG
 
Protein sequence
MITLASDFGS PYPAAMKGVI RRHTDAELID VAHDLPRGDP RAAAFWLRFV LPEFPPAVHC 
AVIDPGVGTD RDALVVRAGS HVLVAPDNGL AMPPARALAR EKEQDENIEA FVVDVGEPAS
ETFHGRDVFA PTAARIRTAL DDNPAKATPE AVSETLAAMD DLSPATDPVD LVLPDPSVER
DDAGDPVAVD GEVLAIDRFG NVVTNVPGEL IRGRDWVRIN GELTPVAETF GAVDSGDRLV
TVGSHGYVEC DVNDGRGDGA FDLRPGESVR LVADNVSL