| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1035 |
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| Symbol | |
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| ID | 7400106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1027757 |
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| End bp | 1028485 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643708102 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_002565702 |
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| Protein GI | 222479465 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0557588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCCCTT CAGAAGATCA GAGCGACAAC CAGACCGGTC CCGTGGTTGA GATCGAACTC
ACTGTTCAGA ACCCAGCGTA TCCGTTCGTC GGCGTGTCCG AGGAAGAACA GTGTCGGGTC
GAACTCGCAA AGATCATCCC TCGTCCGGAA GGGAAATACG CGGAATTCTT CAACGTGCTA
GGCGCGCCTC CCGCTCGAAT CACGAGTCAC GTAGACACGT ATGACACCGT CGAAACCTCA
CTCCTCAGCG AATACGATGA CGGCGGTCTG TTCGAATTCA TCGTGTCTGG AAACTGTCCG
GCGTATCGGC TCGCTGAACT CGGAGCCCTC CCGAAAACCG TCGAAGGCGT CGACGGTCGT
GGGCGTATCG TCGCCGAGAT CCCGCCGCGG AATGATCCGC CAGCAGTTAC CGGACAGTTC
CTTGAGGAGT ATTCCGATTT CGAACTGATA GCGAAACGGA CGAAAGACAC GCACACATCC
ATGTTGACTC CCTCTACGCT CCAGCAGTCG ATCCTCAACG ATCTGACTAA TAGACAGCAA
GAAGTTCTGC AGACCGCGTT TGGGATGGGA TATTACGAAT GGCCACGCGA CTGTACGGGA
CAAGACGTTG CCGACGAACT CGGGATCACA TCGGCTACCT TCTCAGAACA CGTCTTTGCA
GCCGAGCGCA AGATCCTCGC ATTCCTGTTT GGAAACGCCG CCAAGACGCA CCTGACCAGA
GAGACGTGA
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| Protein sequence | MGPSEDQSDN QTGPVVEIEL TVQNPAYPFV GVSEEEQCRV ELAKIIPRPE GKYAEFFNVL
GAPPARITSH VDTYDTVETS LLSEYDDGGL FEFIVSGNCP AYRLAELGAL PKTVEGVDGR
GRIVAEIPPR NDPPAVTGQF LEEYSDFELI AKRTKDTHTS MLTPSTLQQS ILNDLTNRQQ
EVLQTAFGMG YYEWPRDCTG QDVADELGIT SATFSEHVFA AERKILAFLF GNAAKTHLTR
ET
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