Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1032 |
Symbol | |
ID | 7400103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1025053 |
End bp | 1026708 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708099 |
Product | type II secretion system protein E |
Protein accession | YP_002565699 |
Protein GI | 222479462 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.621216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.536815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGTG ACGCACGCGA GGACGACGCC GGGGATCGGA TCGAGGCCCT CCGGCGGCGG CTCTCGCGGA CGTGGGAGGT GCTACGGGGG TCCGACATCG ACGTTCGGGC CTTCAGACCG GGCGATGACG GCCCGCTCGC CGACTTCGCG ATCCCCGACG GCGAAAGCGA GGTCGACCGG TACTGGGTGA ACGCCCCGTA CGCGTACGTC GTGATCACCT ACCACGACGC GGAAAGCGAA CACCGGTACT ACGCGGTTGA GCCGGAGCTG GACCGGTTCG AGCGCGACCT CCTCGACCGC GTGGTCGACG ACATCCGGGA CCCGCTGCTG TATCGCGAGG GTACCGGACG GACCGACGAG GAAACGCTCA GAACCGAGCT TGAGGGGCTG TTAGAGGGGT ACGGCGTCGA CATCGGGATG GATACGTTTC ACGCGCTCGC GTACTACCTC TACCGCGACT TCCGCGGCTA CGGGAAGGTC GACCCCTTCC TCAACGACCG CCACATCGAG GACATCTCGT GTGACGGTTA CGACCTCCCG ATCTTCGTGT ACCACGACGA CTACACCGAC ATCGAGACCA ACGTCTCGTT CGGGAAGTCG GCGCTCGACA ACTACGTGAT CCGCCTCGCT CAACAATCTG GGCGCCACAT CTCCGTCGGG GACCCCATGG TGGAGACGAC GCTGCCGGAC GGGTCGCGCG CGGAACTCGC GCTCGGCGAA GAGGTGACCC CGCGTGGCTC CGCGTTCACG ATCCGCCAGT ACGCCGAGGA CCCGCTCACG CCGATCGATC TGGTGGAGTA CGGCACGTTC TCGATCGAGC AGATGGCGTA CTTCTGGCTC TGTATCGAGC ACAACAAGAG CCTCATCTTC GCGGGCGGCA CCGCCTCCGG GAAGACCACC TCGATGAACG CGGTGTCGAT GTTCGTCCCG CCGCGCGCGA AGATCCTCAC CATCGAGGAC ACCCGCGAGC TCTCTCTGTA CCACGACAAC TGGCTCTCCT CGATCACCCG CGAGCGTCGC TACGAGGGCG CCGACATCGA CATGTACGAT CTGCTCCGGT CCGCGCTGCG CCACCGCCCC GAGTACATCG TGGTCGGGGA GGTCCGTGGG GCGGAAGCCA TCACCCTGTT TCAGGCGATG AACACGGGCC ACACCACCTT CTCAACGATG CACGCCGACT CGATCGAGAC GGTCATCAAC CGGTTGGAGA ACGAGCCGAT CAACGTCCCG CGCGCGATGG TCCAGTCGCT CGACATGCTG TCGATCCAGA CGCTGACCCG GTCGGGCGAC CAGCGCGTCC GGCGCGCGAA GACGATCGGC GAGATAGGCG GAATCGACCA GCGCACCGGG GAGCTCGACT ACTCCTCGGC GTTCGAGTGG GACGCGGAGA CCGACGAGTT CAGCCGGAAC GACTCGTCGC TCATGGAGGA GATCGCCGAC GAGCGCGGCT GGTCCCGGTC GGAGCTACTT CGCGAGGTCC GGCGCCGCGA GCGCTTCCTC GAACTGCTCC GCGGGCTCGG CGTCACCGAC TACCGGGCGT TCACCGCCCT CGTCAACGAG TACTACGCCG ATCCTGAACG CGTGATGGAC CGGCTCGAAG AACGGAGCGA CGGCGCGGCC AAACCCTCGG GACCGGTCGG TGACGCCGCC GACTGA
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Protein sequence | MASDAREDDA GDRIEALRRR LSRTWEVLRG SDIDVRAFRP GDDGPLADFA IPDGESEVDR YWVNAPYAYV VITYHDAESE HRYYAVEPEL DRFERDLLDR VVDDIRDPLL YREGTGRTDE ETLRTELEGL LEGYGVDIGM DTFHALAYYL YRDFRGYGKV DPFLNDRHIE DISCDGYDLP IFVYHDDYTD IETNVSFGKS ALDNYVIRLA QQSGRHISVG DPMVETTLPD GSRAELALGE EVTPRGSAFT IRQYAEDPLT PIDLVEYGTF SIEQMAYFWL CIEHNKSLIF AGGTASGKTT SMNAVSMFVP PRAKILTIED TRELSLYHDN WLSSITRERR YEGADIDMYD LLRSALRHRP EYIVVGEVRG AEAITLFQAM NTGHTTFSTM HADSIETVIN RLENEPINVP RAMVQSLDML SIQTLTRSGD QRVRRAKTIG EIGGIDQRTG ELDYSSAFEW DAETDEFSRN DSSLMEEIAD ERGWSRSELL REVRRRERFL ELLRGLGVTD YRAFTALVNE YYADPERVMD RLEERSDGAA KPSGPVGDAA D
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