Gene Hlac_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1027 
Symbol 
ID7400098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1018784 
End bp1019308 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content62% 
IMG OID643708094 
ProductDoxX family protein 
Protein accessionYP_002565694 
Protein GI222479457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.339861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.662698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATACC AATCGAGCAA TCCACTGGTC GGCGAGGTCG AGTTTGCACT GGACGGTCCA 
TGGGCGGCGT ACTGGATCGC CTTCCTACGT GTCGTCACCG GATGGTGGTT CTTCCACTCC
GGAATTACGA AGATCATCGA GAGCGGGTTC TCGTACAGCT ACGGGGCGAT GTACATGCAG
GGCATGTCGG ACACCGCTCT CGGCGGCATC CCGGTCTGGA TGGGGAACAA CCTCGCGTGG
CTCATCGAGC CGGGCGTTCC CCTCTTCGAG ACGCTGATCG GGCTCGCGCT GATCGCGGGC
GCGTTCACCC GGCTGGCCGC CTTCGGTGGG GTCATCTTCA TGACCCTGTT CTGGGTCGGC
AACGCCGGGT TCGGCCACGG ACTCGTCAAC AGCGACTTCA TGGGCCTGCT GTTGTTCGTG
ACGATGATCG TGCTCGCGGC CGGCCGGTAC TACGGTCTCG ACGCGATCAT CGAGAAGCTC
GACGTGGTCG AACAGCACCC GAAACTCCGC TACCTGCTCG GTTAA
 
Protein sequence
MSYQSSNPLV GEVEFALDGP WAAYWIAFLR VVTGWWFFHS GITKIIESGF SYSYGAMYMQ 
GMSDTALGGI PVWMGNNLAW LIEPGVPLFE TLIGLALIAG AFTRLAAFGG VIFMTLFWVG
NAGFGHGLVN SDFMGLLLFV TMIVLAAGRY YGLDAIIEKL DVVEQHPKLR YLLG