Gene Hlac_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1023 
Symbol 
ID7401919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1015303 
End bp1015707 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content53% 
IMG OID643708089 
Productputative transcriptional regulator, AsnC family 
Protein accessionYP_002565690 
Protein GI222479453 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.613371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAA AAGTCGGTGT TTCGTCCAGT ACGGTCGCGA ATCGAATCAA CGATCTTGAG 
AAGCGTGGCG TCATTCTCAG TAATCACCCA ATCATAAACT ACAGTGAAAC GGGGTTAGGT
CATCACCTCC TCGTCACCGC GACAGTTCCC CTCCGGGACC GAGAGAAGAT GATGGACGGC
ATCATGGAGG TATCCGGCAT CGTAAGCATT CGTGAGCTAT TGACGAACAA GGAGAACCTG
TCACTGGAAG TAGTGGGCCG CACGTCGGAA GACATTGAGG AGACCCTCGA ATCGCTGGAC
TCGCTCGGCG TCGATATTGA GCGGATGAGG ATGATGAAAC AGGAACGAAC CAACCCGTAC
AACCACTTCG GGGAAGAGTT TGCGAACGAG GAGGACACTG GATAA
 
Protein sequence
MAGKVGVSSS TVANRINDLE KRGVILSNHP IINYSETGLG HHLLVTATVP LRDREKMMDG 
IMEVSGIVSI RELLTNKENL SLEVVGRTSE DIEETLESLD SLGVDIERMR MMKQERTNPY
NHFGEEFANE EDTG