Gene Hlac_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1011 
Symbolrpl44e 
ID7401906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1005729 
End bp1006010 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content65% 
IMG OID643708077 
Product50S ribosomal protein L44e 
Protein accessionYP_002565678 
Protein GI222479441 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1631] Ribosomal protein L44E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGC CACGTCGTTT CAACACGTAC TGTCCCAACT GTGACTCCCA CCAGGAGCAC 
GAAGTGGAGA AGGTTCGATC GGGTCGGGCG ACCGGAATGA AACGCGACGC GCGCCAGCGA
CGCCGCGCGC TCGCGACGAT CGGCAACGCC GGCGGGTACT CGAAGGTGCC TGGTGGCGAC
AAGCCGACCA AGAAGACCCA CCTGAAGTAC CGCTGCGGCG ACTGCGGCAA GGCCCACATG
CGCAAGGGCT GGCGCGCCGG CCGGCTCACG TTCCAGGAGT AA
 
Protein sequence
MEMPRRFNTY CPNCDSHQEH EVEKVRSGRA TGMKRDARQR RRALATIGNA GGYSKVPGGD 
KPTKKTHLKY RCGDCGKAHM RKGWRAGRLT FQE