Gene Hlac_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1007 
Symbol 
ID7401902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1003675 
End bp1004427 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID643708073 
Productprotein of unknown function DUF75 
Protein accessionYP_002565674 
Protein GI222479437 
COG category[R] General function prediction only 
COG ID[COG2047] Uncharacterized protein (ATP-grasp superfamily) 
TIGRFAM ID[TIGR00162] conserved hypothetical protein TIGR00162 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA TCGAGATCGA CGAGGTCGCC ACGCCGGAGC TCGACGACCC GGTGCTCATC 
GAGGGACTGC CGGGCGTCGG CCATGTGGGG AAGCTCGCGG CCGAACACTT ATTAGAGGAG
TTCGACGGTG AGTTAGTCCG CCGCGTGTAC TCCACCGAGT TCCCGCCGCA GGTGAGCATC
GACGGCGACG GCGTCGCCGA GCTGACCTGC GCGGAGTTCC ACGCGGTCGA GACCGACGGC
GCCGACCTGC TCGTGTTGAC CGGCGATCAC CAGGCCGGCT CGAACGCGGG TCACTACAAA
CTCACCACAA CGTTCCTCGA CATCGCCGAG GAGTTCGGCG CGACCCGGGC GTTCGCACTC
GGCGGCGTGC CGACCGGCGA GCTCGTCGAG GAGTACACCG TGCTCGGTGC GGTCTCCGAC
GGCGACCTCA TCGAGGGACT GGAGGACGTC GGCGTCGAGT TCCGGCCAGA CGAGCCCGCC
GGCGGTATCG TCGGTGTCTC CGGGCTCGTG CTCGGGCTCG GCGGTCGACG CGGGTTCGAC
GCCGCCTGCC TGATGGGTGA GACGAGCGGC TACCTCGTCG ATCCGAAGAG CGCTCGGGCG
GTGCTCGAAG TGCTCGCGGA CCACCTCGAC TTCTCCATCG ACTACGAGAG CCTGGAGGAC
CGCGCCGAGG AGATGGAGGA GGTCGTCGGT AAGATCCAAG AGATGCAGGA CGGGCCGGCG
GTGCCGGACG ACGACCTGCG CTACATCGGG TAA
 
Protein sequence
MDDIEIDEVA TPELDDPVLI EGLPGVGHVG KLAAEHLLEE FDGELVRRVY STEFPPQVSI 
DGDGVAELTC AEFHAVETDG ADLLVLTGDH QAGSNAGHYK LTTTFLDIAE EFGATRAFAL
GGVPTGELVE EYTVLGAVSD GDLIEGLEDV GVEFRPDEPA GGIVGVSGLV LGLGGRRGFD
AACLMGETSG YLVDPKSARA VLEVLADHLD FSIDYESLED RAEEMEEVVG KIQEMQDGPA
VPDDDLRYIG