Gene Hlac_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1003 
Symbol 
ID7401898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp997805 
End bp998266 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID643708069 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_002565670 
Protein GI222479433 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGA CTGCTCGAGA AAAGATCCAG CTAAGCGATT CGGAGAGGGA CGCATTCTTA 
GATCGTGTCA GCACCGGAGT GCTTTCCCTG TCGACACCGT CCGACGAGCC GCCACACAGC
GTCCCGGTTT CGTTCGGATA CAACGCTGTA CAGACCGCGT TCTACTTCCG GATAGCCGAT
CTCCCGCCCA AGCGGAAAGG CGAACTAGAC GGCAGATCCG TGACGTTCGT CACGTACGAT
AGGGACGAGG AGATCGGCGG CTACGTCAGT GTCGTCGCTC AGGGGACTCT CGAACCGACA
ACAGGTGACG AGACCGCCAC GGAAGCGCTC GCGGGATTCG AAGGCGTCAC GATCCCGTTC
GTGGATATCT TCGGCGATCG ACCAGCAGAT GTCAGCTTTT CGTTCTACCG ACTCGTCCCG
GAGACGCTCA CCGGGCGCAA AGAGGTGGTC GCGGAGCTGT GA
 
Protein sequence
MVETAREKIQ LSDSERDAFL DRVSTGVLSL STPSDEPPHS VPVSFGYNAV QTAFYFRIAD 
LPPKRKGELD GRSVTFVTYD RDEEIGGYVS VVAQGTLEPT TGDETATEAL AGFEGVTIPF
VDIFGDRPAD VSFSFYRLVP ETLTGRKEVV AEL