Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1000 |
Symbol | |
ID | 7401895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 993873 |
End bp | 995621 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643708066 |
Product | histidine kinase |
Protein accession | YP_002565667 |
Protein GI | 222479430 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.798946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGGCC TGAGTCCACT CTCCGTCGCG CTACTCACCG CGGTCGTGAC CGGCACCTCC GCGGCGATCC TCGCGTGGCG GGAGCGCCCG GACGCGGGTG CGACGTGGCT CGCGCTGCTG CTCCTCGGGC AGGTCTGGTG GACGACGTTT CTCGTCTTCG AGTTGGAGGC GTCGACGCTG GCCGCGAAGG CGCTCTGGTA CGACATTCAG TGGGTCGGGG TGGTGCTGGT TCCGGTAGGG TGGCTGTTGT TCGCACTGGA GTACACGGGC CGGGACCGGT ACGTGAGACC CGGAGTCGTG GCGGCGGCCT GCGTCGCGCC GGCGATAACC GTTCTCGTGG TCGCGACGGG TGACCCGGCC GGACTCATCG TCGCCAACCG TGAGGTCGCC GACACCGCAG TCGGGTCGTT TCTCCGCGTC GACCCCGGGC CGTGGTACTA CGTCATCGCC GGCTACACCT ACCTTCTGGG GCTGATTGGA TCGGTCCCGA TCCTCCAGCT CGTCCGTGAC GACGCCCGCC CGTTCCGAGG ACAGAGCGCG GCGCTGCTCG TGGGCACGGC GGCACCGTGG GTCAGCAGCC TCCTCCACGT TACTGGCGCC ATCCCGGTTC CCGGACTCGA TCCCACGCCG CTCGCATTCG CCGTCTCCGG GGTCGCGTAC CTCCTCGCGC TCTCGCGGTT CCGCCTGCTC ACGCTCACGC CCGCGCCGCG ACGGCGGGCG CGCCAGCTGG TGTTCGAGCA GCTTCACGAT CCCGTGTTCG TCGTCGGTAC CGAGGGCCAC GTACTCGACT TGAACCGCAG TGCTGCCGAC GTGTTCGAAG TCGACCGGCG GACGGCGGTT GGAGAGGCGG CGAGTACGGT CATCCCCCGC TACGACTCGC TCAACGGCGA TCGCGGCGAC ATCGGCCCGC TCTCGATCGT GGGGCGGAAC GGTCGGCAGC CCTACGAGAT CACGGTGCGA GGCGTGAGCG ACGACCACGG GCGAGCGGTC GGCCGCCTTA TCGTCTTCCA CGACGTGGGC GAGTACCTCG GCCAGCAGCA GCGGCTGAAC GTGCTCAACA GGGTGTTCCG GCACGACGTT CGGACCGAGA CGAACCTGAT CCACGGGTAC GCCGATCAGC TGATGACGAA CCCGAGCGAC GAACGGGCGC TGTCGATCGT CAAGAAGAGC GCCTCGCGTA TCCTCGATCT CAGCGAGCGC ACCCGGACCG CCAGCGAGCT GTTCGACCCG GTCTCGGAGC CGGAGCCGCC GGTCCCGCTG TCCGAGGTGG TCGACGAGGC GGTCGCGGAC CTCCGCGCAG AATCTCCCGA CGCACGGGTG TCGGTCGACG GCGATCTACC GGATGTAAGC GTGCCGGCGA CCCTCCGGGT CGTTGCGTCG AACCTCTGTT CGAACGCGGT CGAGCACAAC GACGCGGCCG CGCCGTCCGT GTGGCTCGAG GCGGCCGTCG AGAACGGCTG GGTCGAACTC TCTGTCGCCG ACGACGGGCC GGGGATCGAC CCGGCGGAGT ACGAGGTCCT GGCGCACGGC ACGGAGACGC CGCTGGAGCA CGGCAGCGGA ATCGGCCTGT GGATCGTGAA GTGGGGGATC GACCAGGTAG GCGGGAGCGT CTCCTTCGCG GAGCGGGAGC CCCACGGGAC GATCGTCACG GTCTCCGTTC CCACGGGCGA CGCGGTACCC ATCAATGGGG CCGGCTCGGA GCACGCCGAG TCCGCGGAAT CGACGGACTC GGCGGGCACA GGTCAGTAG
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Protein sequence | MIGLSPLSVA LLTAVVTGTS AAILAWRERP DAGATWLALL LLGQVWWTTF LVFELEASTL AAKALWYDIQ WVGVVLVPVG WLLFALEYTG RDRYVRPGVV AAACVAPAIT VLVVATGDPA GLIVANREVA DTAVGSFLRV DPGPWYYVIA GYTYLLGLIG SVPILQLVRD DARPFRGQSA ALLVGTAAPW VSSLLHVTGA IPVPGLDPTP LAFAVSGVAY LLALSRFRLL TLTPAPRRRA RQLVFEQLHD PVFVVGTEGH VLDLNRSAAD VFEVDRRTAV GEAASTVIPR YDSLNGDRGD IGPLSIVGRN GRQPYEITVR GVSDDHGRAV GRLIVFHDVG EYLGQQQRLN VLNRVFRHDV RTETNLIHGY ADQLMTNPSD ERALSIVKKS ASRILDLSER TRTASELFDP VSEPEPPVPL SEVVDEAVAD LRAESPDARV SVDGDLPDVS VPATLRVVAS NLCSNAVEHN DAAAPSVWLE AAVENGWVEL SVADDGPGID PAEYEVLAHG TETPLEHGSG IGLWIVKWGI DQVGGSVSFA EREPHGTIVT VSVPTGDAVP INGAGSEHAE SAESTDSAGT GQ
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