| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0987 |
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| Symbol | |
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| ID | 7401881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 978271 |
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| End bp | 978987 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643708052 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002565654 |
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| Protein GI | 222479417 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCGTCG GGTACCTGCT CACGGCGGTC GCCGAGCGCC TTCCCCGCCG ACGGATCAGC
ATCAAGATTA TTATTCCGAT CGCGCGGGTT CTCATCTTCG GAACCGCGGC GTATCTGGTC
TTGGGACCGT TGCTCCGACT ATCGGCCGCA CAGTTGCTCG CAGTGTCGGG ACTGTTCGGG
GCGGCTCTGG GGTTCGGCCT GAAGGACCTC TTCGCGGGGA TAATCGGTGG GCTGGTGCTC
GTGACCGAGC GTCCCTACCA GGTCGGCGAC AAGATCACCA TCGACGACGA CCACGGCGAG
GTAACCGACA TCGACCTCCG GGCGACGACA CTGAGGACGC CCGACGACAG CGCCGTAAGT
GTCCCGAACG CAACGATGTT CACTGCGAAC GTCTCGAACG CCAACAACGG CCAGCCGGAG
ATGATGGTCG TCGTTGAACT CGCGGTCACT GCCTCTGCTG ACGTCGAACG AGTGAGTGCG
ATCGTCAAGG AGGCCATGAT GACCTCGAAG TACGTCTACG TCGACGACGA CCACCCGTTC
GTGGTCCTGA TCGAGGACGA GTCCTACTAT CGGACGATTC GCGGCAAGGC GTATGTGGCC
GACGTGCGCG ACGAGTTCGC ATTCGCCTCA GACGTGACAG AGCGCTCGAT GGCCGTCTTC
GACAGCGAAG GGGTCGAAAT GCCCGAGGCG CCCGTTCACG TCTCCGAACA CCGCTGA
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| Protein sequence | MVVGYLLTAV AERLPRRRIS IKIIIPIARV LIFGTAAYLV LGPLLRLSAA QLLAVSGLFG
AALGFGLKDL FAGIIGGLVL VTERPYQVGD KITIDDDHGE VTDIDLRATT LRTPDDSAVS
VPNATMFTAN VSNANNGQPE MMVVVELAVT ASADVERVSA IVKEAMMTSK YVYVDDDHPF
VVLIEDESYY RTIRGKAYVA DVRDEFAFAS DVTERSMAVF DSEGVEMPEA PVHVSEHR
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