Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0980 |
Symbol | |
ID | 7401874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 972359 |
End bp | 972967 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643708046 |
Product | protein of unknown function UPF0126 |
Protein accession | YP_002565648 |
Protein GI | 222479411 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACGG TCGGGCTGGT CGCGTTCGCG CTCGTCGGGT CGTCGAAGGC GATCCGCGAG GAGTTCGACC TGTTCGGGAT CGTCATCGTC GGGCTGGCGA TGGCGTTCGC CGGCGGGGCG ACCCGCGATC TTCTCGTGGC GCGGGTTCCG CTCGCGCTGC AATCCCCGAT CGAGATCTGT CTGGGGCTCG TCGGCGTCGG CTTGGCGATC GGGCTGAACG TCGTGCTGTC GTCGCCGGAG ACGCATCCGG TCACCCTCGT CTCGGACGCC ATCGGGCTCG CGGCCTTCGC GACGGCCGGC GCGATCGTCG CGACCGAGGT CGGTGTGTCG GCGTTCGGCG TCGTGGCGAT CGCGACGATC AACGCCGTCG GCGGCGGGGC GTTCGCGGAC ATCCTCCTCG ATCGGGCTCC CTTCATCCTC TTCGAGGACT TCTACGCGAG CTGTGCGGTC CTCGGCGGGA GCGCGTACTG GGTAGTGGGA ACGTTGGGTG CGACTGCCGG GACCGCCGCC GCGGCGTGCG CGGTCGTAAC GGTGGGGACT CGGCTGGCCG CGGTGACGTA CGGCTGGAAC CTCCCGACGG CGCAGAACTT GGAACTGCAA CGGAAATGA
|
Protein sequence | MNTVGLVAFA LVGSSKAIRE EFDLFGIVIV GLAMAFAGGA TRDLLVARVP LALQSPIEIC LGLVGVGLAI GLNVVLSSPE THPVTLVSDA IGLAAFATAG AIVATEVGVS AFGVVAIATI NAVGGGAFAD ILLDRAPFIL FEDFYASCAV LGGSAYWVVG TLGATAGTAA AACAVVTVGT RLAAVTYGWN LPTAQNLELQ RK
|
| |