Gene Hlac_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0980 
Symbol 
ID7401874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp972359 
End bp972967 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID643708046 
Productprotein of unknown function UPF0126 
Protein accessionYP_002565648 
Protein GI222479411 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGG TCGGGCTGGT CGCGTTCGCG CTCGTCGGGT CGTCGAAGGC GATCCGCGAG 
GAGTTCGACC TGTTCGGGAT CGTCATCGTC GGGCTGGCGA TGGCGTTCGC CGGCGGGGCG
ACCCGCGATC TTCTCGTGGC GCGGGTTCCG CTCGCGCTGC AATCCCCGAT CGAGATCTGT
CTGGGGCTCG TCGGCGTCGG CTTGGCGATC GGGCTGAACG TCGTGCTGTC GTCGCCGGAG
ACGCATCCGG TCACCCTCGT CTCGGACGCC ATCGGGCTCG CGGCCTTCGC GACGGCCGGC
GCGATCGTCG CGACCGAGGT CGGTGTGTCG GCGTTCGGCG TCGTGGCGAT CGCGACGATC
AACGCCGTCG GCGGCGGGGC GTTCGCGGAC ATCCTCCTCG ATCGGGCTCC CTTCATCCTC
TTCGAGGACT TCTACGCGAG CTGTGCGGTC CTCGGCGGGA GCGCGTACTG GGTAGTGGGA
ACGTTGGGTG CGACTGCCGG GACCGCCGCC GCGGCGTGCG CGGTCGTAAC GGTGGGGACT
CGGCTGGCCG CGGTGACGTA CGGCTGGAAC CTCCCGACGG CGCAGAACTT GGAACTGCAA
CGGAAATGA
 
Protein sequence
MNTVGLVAFA LVGSSKAIRE EFDLFGIVIV GLAMAFAGGA TRDLLVARVP LALQSPIEIC 
LGLVGVGLAI GLNVVLSSPE THPVTLVSDA IGLAAFATAG AIVATEVGVS AFGVVAIATI
NAVGGGAFAD ILLDRAPFIL FEDFYASCAV LGGSAYWVVG TLGATAGTAA AACAVVTVGT
RLAAVTYGWN LPTAQNLELQ RK