Gene Hlac_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0971 
Symbol 
ID7401865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp961462 
End bp962343 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID643708037 
ProductThreonyl/alanyl tRNA synthetase SAD 
Protein accessionYP_002565639 
Protein GI222479402 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGG AGCTGTACCT CGCGGACGAC ACGGTGACGA CCTTCGAGGC GACCGTCGAG 
CGCGTGCTCG ACGACCGGGT CGTCCTCGAC CAGACCCATT TCTACCCCAC GGGCGGGGGA
CAGCCCCACG ACACGGGGAC GCTCCGGGTC GCGGATGCGG AGATGGCCGA CGGTGACGGT
GTCGCTGACG GCGACGACGC TGATCGACGC TGGCGGGTCG TCGACGTCGA GAAGAAGGAC
ACCGTGTATC ACACCCTCGA ACCGGCAGGA GACGGAGCTT CTGGGGCCGG CGACGACTCG
GCGACCGATA CCGTCGCACC CCTCGAACCC GGGACAGTCG TCGTGGGCGA GATCGACGCG
GCGCGGCGCC GGGCCCACTC TCGGTACCAC ACCGCACAGC ACTTGCTCTC GGCGCTGCTT
TTGGCGGAGT TCGACGCGTC GACGACGGGC AATCAGCTCT ACGACGACCA CGCGCACCTC
GACGCGGCGT ACGAGCGCTT CGACGACGGC GACCTCGTGC AGATCGAAAC CCGGCTCAAC
GAGCTCGTGG CTGACGAGCG CCCGGTGACG AGCTACACGA TGAATCGCGA AGAGGCGGAG
GCGACACTCG ACACCGACCG CACCCGAATC GACCTGCTCC CCGACTCGAT CTCGGAACTC
CGGATCGTCG AGATTGGCGC GGCGAGAGGA ACGGATGGCA ACGATGGCGA TGATGGGGAC
GATGGTAACA AGGAACCGTA CGACCGCACC GCCTGCGCCG GGACGCACGT CGCGAACACT
GCCGAGATCG GCCCGATCGT CGTCACCGGT CGGGAGACGA AAGGAAGCGA CGAGGATCGC
GTCCGGTTCG CGCTCGCCGA ACACGTCGAC GGCAAGGAGT GA
 
Protein sequence
MTEELYLADD TVTTFEATVE RVLDDRVVLD QTHFYPTGGG QPHDTGTLRV ADAEMADGDG 
VADGDDADRR WRVVDVEKKD TVYHTLEPAG DGASGAGDDS ATDTVAPLEP GTVVVGEIDA
ARRRAHSRYH TAQHLLSALL LAEFDASTTG NQLYDDHAHL DAAYERFDDG DLVQIETRLN
ELVADERPVT SYTMNREEAE ATLDTDRTRI DLLPDSISEL RIVEIGAARG TDGNDGDDGD
DGNKEPYDRT ACAGTHVANT AEIGPIVVTG RETKGSDEDR VRFALAEHVD GKE