Gene Hlac_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0956 
Symbol 
ID7401850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp950833 
End bp951375 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID643708022 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002565624 
Protein GI222479387 
COG category[S] Function unknown 
COG ID[COG4309] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC TCGATGTCAG ACAGATCCCG CCGAGCGAGC GACACGACCG GATACACGAC 
GAGTTTGCCG AACTGGAGCC CGGCGAGACG CTCACCATCG TCAACGACCA CGAGCCGACG
CCGCTCTACC ACGAGATGGC GGCGGAGGTA CCCGCGTTCG ACGCTGACGG CTACGCCGTC
GAGCGCGAGG AGGCGTCGCG GTTCGTCGCC GAGTTCCCGA AGGTCGGACC CGAGTCAGGC
CCGGAGCAAG TCCGGCTCGC GGATCTCGAC GGCGAGCCGC ACGCGGCGGC GTTCCCCGGG
CGCGAGCCGA AGACGGTCCG ACTGTCGCTG GACGCCGGCC AGAGCGTTCC CGAGCACACC
CACCCCGACC GGACGGTGTT GTTCCACGCG CTGACGGGGG CGTTCGAGGT GCGACTCGAC
GGTGAGATGC ACGCGGTCGA AGCGGGGGAG ATTGTCAGGT TCGACGGCGA GACGGCGATC
GAGCCGACCG CGACCGAGGA CGCCACCGCG CTCGTGGTGC TGGCGCTGAA ACCGGACGAG
TGA
 
Protein sequence
MTELDVRQIP PSERHDRIHD EFAELEPGET LTIVNDHEPT PLYHEMAAEV PAFDADGYAV 
EREEASRFVA EFPKVGPESG PEQVRLADLD GEPHAAAFPG REPKTVRLSL DAGQSVPEHT
HPDRTVLFHA LTGAFEVRLD GEMHAVEAGE IVRFDGETAI EPTATEDATA LVVLALKPDE