| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0936 |
|---|
| Symbol | |
|---|
| ID | 7401308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 935342 |
|---|
| End bp | 935875 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643708002 |
|---|
| Product | Protein of unknown function DUF293 |
|---|
| Protein accession | YP_002565604 |
|---|
| Protein GI | 222479367 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0850424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.275415 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGA TTGAGCTTAC ATCGAGTCAG AAAAGCATCC TCACGGCCCT CATCAACCTG
TACGGGGAAC AGGAAGACGC CGTCAAAGGC GAGGCGATCG CCGAGGAAGT CGACCGCAAT
CCCGGCACGA TCCGCAACCA GATGCAGAGC CTGAAGGCCC TCCAGCTGGT CGAGGGCGTC
CCCGGCCCGA AGGGCGGCTA CAAGCCCACC TCGAACGCGT ACGAGGCGCT CGACATCCAG
CGGATGGACG AGCCCGCCGA CGTCCCCATC TTCCACGAGG GCGAGGAGGT CACGGGCGTC
AACGTCGACG GGATCGACCT CTCCAGCGTT CACCACCCCG AGCTCTGCCG CGCCGAGATC
CACGTCCAGG GCTCCGTCCG CGACTTCCAT GAGGGCGACT CCGTCACGGT CGGCCCGACA
CCGCTCTCGA AGCTCGTCAT CGACGGGACT GTCGACGGGA AAGACGACAC CGCCAACGTC
CTCATCCTCC GAATCGACGA CATGCGAGCG CCCGACGAGC CCGCCGAGCA CTAA
|
|---|
| Protein sequence | MSSIELTSSQ KSILTALINL YGEQEDAVKG EAIAEEVDRN PGTIRNQMQS LKALQLVEGV
PGPKGGYKPT SNAYEALDIQ RMDEPADVPI FHEGEEVTGV NVDGIDLSSV HHPELCRAEI
HVQGSVRDFH EGDSVTVGPT PLSKLVIDGT VDGKDDTANV LILRIDDMRA PDEPAEH
|
|---|
| |