Gene Hlac_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0930 
Symbol 
ID7401302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp930980 
End bp932083 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content69% 
IMG OID643707996 
Productaminotransferase class I and II 
Protein accessionYP_002565598 
Protein GI222479361 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0231483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0190579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTACG AGGAGCCGAA GTTCTTCCAC GTGATGCAGT ACGCGGGCGC GGCCGACGGC 
GACGTCATCG ACATGGTGAG CGGCAATCCC GACTGGGAGC CACCGGCCAC CCTCCGGGAG
GCGCTCCGTG AGTACGCCGA CCTCCCCTCA GCGGAGTTCC AGTACCCGCC GAGCGAGGGA
CTGTTGGAGC TTCGCGAGGC GATCGCCGAG CGTCGGAACG TCGACGCCGA CCGCGTGGTG
GTCACGAACG GAACCGGCGA GGCGAATTAC CTCGCGATAG CGCGCGCATT CGAGCGTGAC
GCGGGCGACG AGGCGCTACT GATGGATCCC GTCTACCCGT ACTACCCCGG CAAGACGGAC
ATGCTCGGCG GGGAGTCGAC GCTCGTCCCG ACCGAGCGCG ACGGCGGGCT CGATGTCGAC
GCGATCCGCG AGGCCGCAAG CGAAGACACC GCCCTCATCG TCCTGAACAC GCCGAACAAC
CCGACTGGCG CCGTGTACGA CCTCGACGCA GTCCGCGAGG TCGTCGCGGT CGCCGACGCG
GTCGACGCCC TCGTCATGGT CGACGAGGTG TACGACCACT TCGATCTGAC CGGCGAGTTC
GAGTCCGCGC TGATGCTTGA CTCCGATCGC GTGATCGTCA CCAGCGGCTT CTCGAAGTCG
ATGGCGATCA CCGGATTCCG GGTCGGGTAC GGGATCTTCC CCGAGGCGCA CGTCGGCGAC
GCCAAGACGC GGCACATGCT CGTGAACGTC GCCGGGGCGC GTCCCTCCCA GTACGCGGTC
CACCACGCGC TCGCGGAGAC GCCGCCGAGC TACTACGCGG AAGCCCGCGA ACTGCTCGCT
GACCGCGTGG ACGCGTTCAC CGACGCGCTC GACGCGGCGG GCGCGGAGTA CACCCGCCCG
GAGGGGGCGT TCTACGTGCT CGCGCGCTTC GAGGGGTTCC CCGGAACGAT GGAGAACGTC
AAGCGCCTGA TCGACGAGGC CGGCGTCGCC GGGATGCCGG GCGACGCGTT CGGCACCGCC
CGCGGCGAGT GGATCCGGTT CGCCCTGGTG ACGCCGCGGG CTGCCGAGGC CGCAGAGCGA
CTGGCCGACT ACTTCGGGGA CTGA
 
Protein sequence
MEYEEPKFFH VMQYAGAADG DVIDMVSGNP DWEPPATLRE ALREYADLPS AEFQYPPSEG 
LLELREAIAE RRNVDADRVV VTNGTGEANY LAIARAFERD AGDEALLMDP VYPYYPGKTD
MLGGESTLVP TERDGGLDVD AIREAASEDT ALIVLNTPNN PTGAVYDLDA VREVVAVADA
VDALVMVDEV YDHFDLTGEF ESALMLDSDR VIVTSGFSKS MAITGFRVGY GIFPEAHVGD
AKTRHMLVNV AGARPSQYAV HHALAETPPS YYAEARELLA DRVDAFTDAL DAAGAEYTRP
EGAFYVLARF EGFPGTMENV KRLIDEAGVA GMPGDAFGTA RGEWIRFALV TPRAAEAAER
LADYFGD