Gene Hlac_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0928 
Symbol 
ID7401300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp927878 
End bp929635 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content66% 
IMG OID643707994 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_002565596 
Protein GI222479359 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.553151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0125609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGG ACTTCAACTG GGCTGTCGGC GGGGAGGCCG GCGACGGCAT CGACTCGACC 
GGGAAGATCT TTGCGCAAGC GCTCTCTCGG GCGGGTCGAC ACGTGTTCAC GTCGAAGGAC
TTCGCCTCGC GGATCCGAGG CGGCTACACC GCCTACAAGG TGCGAACCTC CGTCGACAAG
GTACAGAGCG TCGTTGACCG GCTCGATGTG CTCATCGCGT TGACCCCCCG GACCATCGAG
GAGAACCTCG ACGAGCTCCA CGAGGGGTCG GTGATCATCT ACGACGGCGA GCGAACCACG
ATGCAGGACG TGGAGATCCC CGACGAGATG ATCGGGATCG ACGTTCCGCT CAAGCGGCTC
GCCGAGGAGG CCGGCGGAGC GATCATGCGC AACGTCGTCG CGCTCGGCGC GGCCTGTGAG
GTCGCCGAGT TCCCCATCGA GAACCTCGAC TCCGCGCTCG AAAAGCGCTT CGCGGATAAG
GGGCAGAAGC TCGTCGACAA CAACAAGGAG GCCGCCCGCG CTGGACAGTC GTACGTCGAC
GAGGAGTACG ACCACGAGTT CGACTACGAC TTGGAGACTA CTGACGAGGA CTACGTCCTC
CTCAACGGCG ACGAGGCCAT CGGGATGGGC GCCATCGCGG CGGGCTGCCG CTTCTACGCC
GGCTACCCGA TCACGCCCGC GACCGACGTG ATGACGTATC TCACGGGCCG GATCGAGCGA
TACGGCGGCC ACGTCGTGCA GGCGGAAGAC GAGCTGTCCG CGATCAACAT GGCGCTCGGC
GCCGCCCGCG GGGGCGCGCG GTCGATGACC GCCACGTCCG GTCCCGGGAT CGACCTGATG
ACGGAGACGT TCGGGCTCAT CGCGACCTCG GAGACGCCGC TCGTCATCTG TAACGTGATG
CGCTCCGGCC CGTCGACCGG GATGCCGACG AAACAGGAGC AGGGCGACCT CAACGGAATG
CTGTACGGCG GCCACGGCGA GGTCCCCCGG TTCGTGCTCG CACCGACGAC GATCGCGGAG
TGCTTCTGGA AGACCGTCGA GGCGTTCAAC CTCGCCGAGA AGTACCAGCT CCCCGTCTAC
CTCACCGCCG ACCTCTCGAT GGCGGTCACC GAGCAGACGT TCACGCCGGA CACCTTCGAC
ATGGACGAGG TGGAGATCGA CCGTGGCTTC GTCGTCGACG AGACGACGAT CGACGACCAC
ATGAGCGAGT CGGGCGGCTT CCAGCCCCAC GAGATCACCG ACGACGGGAT CTCGCCGCGG
GCGTTCCCCG GCACCGCCGA CGGCGCGCAC ATGTCCACCG GCCTCGAACA CGACGAGCAA
GGTCGTCGGA CCGAGGATAC CGGGATGCGC GTCGAGCAGG TCGATAAGCG CAACCGGAAA
GTCGATACCG CCGAGGAGCG CGAGGACTGG AGCCCGCGCG AGTTCGGCGA CGCAGACGCC
GACACGCTCG TGATCTCGTG GGGGTCGAAC GAGGGAGCGC TCGCCGAGGC GGTCGATCTC
CTCGCCGACG AGGGGGTCGA CGTGCGGGTG CTTTCCGTGC CGTACATCTT CCCGCGCCCG
GACCTTTCCG AGGACGTCGA GGCGGCGGAG AACGTCATCG TCGTGGAGTG CAACGAGCGG
GGTCAGTTCG CGAACCTCAT CGAACACGAC GTCTTGGCTC GCGTCGATCG GATAAACAAG
TACAACGGCG TGCGGTTCAA GGCGGACGAA CTCGCAGATG ACATCAAGGA GACCCTCGCG
GCGGGGGTGG AGGCGTAA
 
Protein sequence
MAADFNWAVG GEAGDGIDST GKIFAQALSR AGRHVFTSKD FASRIRGGYT AYKVRTSVDK 
VQSVVDRLDV LIALTPRTIE ENLDELHEGS VIIYDGERTT MQDVEIPDEM IGIDVPLKRL
AEEAGGAIMR NVVALGAACE VAEFPIENLD SALEKRFADK GQKLVDNNKE AARAGQSYVD
EEYDHEFDYD LETTDEDYVL LNGDEAIGMG AIAAGCRFYA GYPITPATDV MTYLTGRIER
YGGHVVQAED ELSAINMALG AARGGARSMT ATSGPGIDLM TETFGLIATS ETPLVICNVM
RSGPSTGMPT KQEQGDLNGM LYGGHGEVPR FVLAPTTIAE CFWKTVEAFN LAEKYQLPVY
LTADLSMAVT EQTFTPDTFD MDEVEIDRGF VVDETTIDDH MSESGGFQPH EITDDGISPR
AFPGTADGAH MSTGLEHDEQ GRRTEDTGMR VEQVDKRNRK VDTAEEREDW SPREFGDADA
DTLVISWGSN EGALAEAVDL LADEGVDVRV LSVPYIFPRP DLSEDVEAAE NVIVVECNER
GQFANLIEHD VLARVDRINK YNGVRFKADE LADDIKETLA AGVEA