| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0927 |
|---|
| Symbol | |
|---|
| ID | 7401299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 927011 |
|---|
| End bp | 927874 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643707993 |
|---|
| Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
|---|
| Protein accession | YP_002565595 |
|---|
| Protein GI | 222479358 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | [TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.313643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00213057 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCAG ACATTCGATT CACCGATTTC AAGTCCGACA AGCAGCCGAC GTGGTGTCCG
GGATGCGGCG ACTTCGGCAC CATGAACGGA ATGATGAAGG CCCTCGCGGA GACGGGCAAC
GACCCCGATA ACACCTTCGT CGTCGCCGGC ATCGGCTGTT CCGGAAAGAT CGGCACGTAC
ATGCACAGCT ACGCGCTCCA CGGCGTCCAC GGACGCGCGC TTCCGGTCGG GACCGGCGTC
AAAATGGCCC GTCCCGACAT CGAAGTGATG GTCGCCGGCG GCGACGGCGA CGGCTACTCC
ATCGGCGCGG GCCACTTCGT CCACGCCGTC CGGCGCAACG TCGACATGAC GTACGTCGTG
ATGGACAACC GCATCTACGG GCTGACGAAG GGGCAGGCCT CGCCTACCTC CCGTGAGGAC
TTCGAGACGT CGACGAGCCC CGAGGGCCCC AAACAGCCCC CGGTCAACCC GCACGCGCTG
GCGCTGGCGT CGGGTGCGAC GTTCATCGCG CAGTCGTTCT CCTCGGACGC GCTCCGCCAT
CAGGAGATCA TCCAGAAGGC GGTCGAACAC GACGGGTTCG GCTTCGTGAA CGTCTACTCG
CCGTGCGTGA CGTTCAACGA CGTGGACACG TACGACTACT TCCGCGATTC GCTGGTCGAT
CTGAAGGAGT CGGACCACGA TCCCAGCGAC AAGGAGGCCG CCAAAGACGT CATCTTCGAC
GACGATACGG AGCATCAGGG TATCATCTAC CAGGACGAGG AGTCGGTGCC GTACCACGAG
CGTCACGGCG TCGACGAGGA CATGTCCGTC ATCCCGGACG GCGCGCCCGA GGGCGCGACG
GACCTCGTCC GCGAGTTCTA CTGA
|
|---|
| Protein sequence | MSSDIRFTDF KSDKQPTWCP GCGDFGTMNG MMKALAETGN DPDNTFVVAG IGCSGKIGTY
MHSYALHGVH GRALPVGTGV KMARPDIEVM VAGGDGDGYS IGAGHFVHAV RRNVDMTYVV
MDNRIYGLTK GQASPTSRED FETSTSPEGP KQPPVNPHAL ALASGATFIA QSFSSDALRH
QEIIQKAVEH DGFGFVNVYS PCVTFNDVDT YDYFRDSLVD LKESDHDPSD KEAAKDVIFD
DDTEHQGIIY QDEESVPYHE RHGVDEDMSV IPDGAPEGAT DLVREFY
|
|---|
| |