| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0925 |
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| Symbol | |
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| ID | 7401297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 923929 |
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| End bp | 925536 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643707991 |
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| Product | phosphoribosylglycinamide formyltransferase |
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| Protein accession | YP_002565593 |
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| Protein GI | 222479356 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000561233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATCG CCGGACTCGC GAGCAACCGG GGACGGAACC TCAGACACAT CGCCGACGCC
GCGCCGGGTG ATGCGGAGCT GTCGGTCGTC CTGACCAACC GCGAACAGGC GCCCGTGCTG
GAGGCCGCCA CGGAACGCCG GATCCCGACC GAGGTCGTCG AGCGCGAAGA CGGGGAGTCG
CGCGAGGCCC ACGAGCGACG GATCCTCGAC CGACTCGCCG ATTACGACTT CGATCTCGTC
TGTCTGGACG GGTACATGCG CGTGCTCACC GACGAGTTCC TCGACGCAGC CCCAACGACG
CTGAACGTCC ACCCGTCGCT TCTCCCCGCG TTCCCCGGTA CGGACGCCCA CGAACAGGTG
ATCGACGCCG GCGTCCGCAC CACCGGCTGT ACCGTCCACG TCGTCACCGA GGCGGTCGAC
GCCGGCCCGA TCGTCACGCA GGAGCCGGTA CCCGTCTACG AGGGCGACGA CGCCGAGGCG
CTGAAAGGCC GAGTACTTCA CGACGCCGAG TTCACGGCGT ACCCGCGAGC AGTGCGGTGG
TTCGCGGAGG ACCGAGTGAC GATCGAGCGC GGGGGCGACG ACGACGCTCC CGTGAACGTG
ACCGTTGACG GCGACACCGG CGGCGACTTC CCCGAGCGGC GGTTCGTCTC CGAGGAGCGC
GCCGACACGC TGCGGTACGG CGAGAACCCC CATCAGGACG CCGCGCTCTA CGTCGACGAC
GGCTGCGAGG AGGCGAGTGT CGTCGGCGCC GATCAGCTGA ACCCCGGCGC GAAGGGGATG
GGGTACAACA ACTACAACGA CGCCGACGGC GCGTTGAACC TCGTCAAGGA GTTCGACGAG
CCCGCCGCCG CCGTGATCAA GCACACGAAC CCGGCCGGCT GCGCAACGAG CGACACGGTC
GCTGACGCGT ACGACCGCGC GCTCCGCACT GACGCGAAGT CTGCGTTCGG CGGTATTGTC
GCGCTGAATC GCGAGTGCGA CGCCGACACC GCCGACGCCA TCGTCGACTC GTTCAAGGAG
GTCGTCGTCG CGCCCGGCTA CACCGACAGC GCGCTCGATG TGCTCCGGGA GAAGAAGAAC
CTCCGCGTGC TCGATGTCGG CCCCCTCGGT GAGGGTGATG AGCGCTTCTC CGAACGGTTC
ACGGAGAAGC CGGTCGTCGG CGGGCGGCTG GTTCAAGAAC GGGACCGCCA GTCGCCGACC
GCCGGCGACC TCGACGTGGT CACCGAGCGC GAGCCCACCG ACGAACAGCT AGCAACGATG
GTGTTCGCGT GGAAGACGCT CAAACACGTG AAATCGAACG GGATCTTGTT CGCGACCGGC
ACCGAAACGG TCGGCGTCGG GATGGGGCAG GTGTCTCGCG TCGACGCCGT CACGCTGGCG
GCGATGAAGG CGGAGAAGGA CGCCGAGGGG AAATCTGCAG AGGGCGCGGT GATGGCCTCG
GACGCCTTCT TCCCGTTCCC GGACGCGATC GAAGAGGCGG CGGAGGCCGG GATCGAGGCC
GTGATCCAGC CCGGCGGCTC GGTCAACGAC GAGGACGTGA TCGCCGCGGC CGACGAACAC
GACATGGCGA TGGCGTTCAC CGGCTCGCGC TGCTTCCGAC ACGACTGA
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| Protein sequence | MKIAGLASNR GRNLRHIADA APGDAELSVV LTNREQAPVL EAATERRIPT EVVEREDGES
REAHERRILD RLADYDFDLV CLDGYMRVLT DEFLDAAPTT LNVHPSLLPA FPGTDAHEQV
IDAGVRTTGC TVHVVTEAVD AGPIVTQEPV PVYEGDDAEA LKGRVLHDAE FTAYPRAVRW
FAEDRVTIER GGDDDAPVNV TVDGDTGGDF PERRFVSEER ADTLRYGENP HQDAALYVDD
GCEEASVVGA DQLNPGAKGM GYNNYNDADG ALNLVKEFDE PAAAVIKHTN PAGCATSDTV
ADAYDRALRT DAKSAFGGIV ALNRECDADT ADAIVDSFKE VVVAPGYTDS ALDVLREKKN
LRVLDVGPLG EGDERFSERF TEKPVVGGRL VQERDRQSPT AGDLDVVTER EPTDEQLATM
VFAWKTLKHV KSNGILFATG TETVGVGMGQ VSRVDAVTLA AMKAEKDAEG KSAEGAVMAS
DAFFPFPDAI EEAAEAGIEA VIQPGGSVND EDVIAAADEH DMAMAFTGSR CFRHD
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