Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0924 |
Symbol | |
ID | 7401296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 922301 |
End bp | 923761 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643707990 |
Product | adenylosuccinate lyase |
Protein accession | YP_002565592 |
Protein GI | 222479355 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000172429 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACCGACG ACTCCGAACC GGCGGGCGAC GACGACATCG CAGGGCTATC GCGGTCGGAC CCGCTCGCGG CGGTGTCACC GCTCGACGGG CGGTACGCCG CTCGGACCGC ACCGCTGTCG CCGTATGCGA GCGAAGCCGC GCTCATGCGC GCCCGGACCC GCGTCGAGGT CGAGTATCTG ATCGAACTCG CAGCCCTCGA CGCGACGCCG ATCGCGCTGG ACGAGGAAGC CGAGGCGGCG TTTCGCGCGG TCTACGAGGA GTTCTCCGCC GAGGACGCCC GCCTGATAAA GGCGCTGGAG GTCGAGGGGG CCGAGGGGTA TGCCGCGACC AACCACGACG TGAAGGCGGT CGAGTACTTC CTGCGGGTTC GATTGGACGG GTTGGACGAT TCCGGAACGA TTGCCGACAG CGAGGCCCTG TACCCGTGGA TCCACTTCGG GCTCACGAGC GAGGACGTGA ACAACCTCGC CCAACGCCTT CTGGTGAAGC AGGCCGTGAG CGAGGCGATC GTGCCCGCGA TTCGCGAGGT TCGGGACGCG CTCGTCGACC TCGCGCAGGA GCACCGCGGG ACGCCCATGC TGGCGCACAC CCACGGTCAG CCTGCGACGC CGACGACGTT CGGCAAGGAG ATGGCCGTGT ACGCTTCGCG GCTCGGCCGC GCGCTCGGCC GAGTCGTCGT CGCGAACGGC GACCTCTCCG GCAAACTCGC CGGCGCCTCG GGCACCTACG CCGCCCACGA CGCGGCCTAC CCCGATGTCG ACTGGCGGGC GTTCGCCGAG TCGTTCGTGC GCGGGCTTGA TCTGGAACAC ACGCCGCTCG CGACGCAGGT GAACCCCTGC GACGACCTCG CGGCGCTGTT CGACGCGCTG CGGGGCGTCA ACAACATCCT CCTCGATCTG GACCTGGACG CGTGGCTGTA CGTCTCCGAC CGCTACCTCG GCCAGCGGAC CGTCGAGGGG GAGACCGGCT CCTCGACGAT GCCGCACAAG GTGAACCCGA TCGACTTCGA GAACAGCGAG GGGAACCTCT CGAAGGCGAA CTCGGATCTC ACGTTCCTCG CCGACTACGT GACGACCTCG CGGCTTCAGC GCGACCTCTC AGACTCCACG GTCAAGCGCA ACATGGGCGC CGCCCTCGCG CACTGCCTGA TCGGTTACTC GAAGGCCGGC GACGGGCTCG CGACGGTCGT CCCGAACGAG ACCGTCATGC GCGAGGAGCT GGCGGCGACG CCCGAGGTGA TCGGCGAGGC CGTCCAGACG ATCCTCCGGC GCGAGGGCGA CACGGACGCC TACGAGCGCG TGAAGGATCT CACCCGCGGG AAGCGCGTTA CCCTCGACGA CTTCCGCGAT CTGTTCGACG ACCTCGACGT CGACGAGGGC GTCCGCGAAG AACTCAAGGC GCTGACTCCA GCGGGCTATG TCGGCGTCGC CGACGAGCTG GTCGACGAGA TCGACGAGTA A
|
Protein sequence | MTDDSEPAGD DDIAGLSRSD PLAAVSPLDG RYAARTAPLS PYASEAALMR ARTRVEVEYL IELAALDATP IALDEEAEAA FRAVYEEFSA EDARLIKALE VEGAEGYAAT NHDVKAVEYF LRVRLDGLDD SGTIADSEAL YPWIHFGLTS EDVNNLAQRL LVKQAVSEAI VPAIREVRDA LVDLAQEHRG TPMLAHTHGQ PATPTTFGKE MAVYASRLGR ALGRVVVANG DLSGKLAGAS GTYAAHDAAY PDVDWRAFAE SFVRGLDLEH TPLATQVNPC DDLAALFDAL RGVNNILLDL DLDAWLYVSD RYLGQRTVEG ETGSSTMPHK VNPIDFENSE GNLSKANSDL TFLADYVTTS RLQRDLSDST VKRNMGAALA HCLIGYSKAG DGLATVVPNE TVMREELAAT PEVIGEAVQT ILRREGDTDA YERVKDLTRG KRVTLDDFRD LFDDLDVDEG VREELKALTP AGYVGVADEL VDEIDE
|
| |