Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0923 |
Symbol | |
ID | 7401295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 921690 |
End bp | 922226 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643707989 |
Product | transposase |
Protein accession | YP_002565591 |
Protein GI | 222479354 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.134513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000447966 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCAGAAT TCGACCGCCT CAACGATGGT ATCGCGTGGA TTGACTTGTC GTTTGTGGAG CGAGATCGAA CGCCGCTCTG TGCGATTGAA GTAGGGATCC GCTGTCACTT GGCCGGTATG TCACTATGCG AGGTGAGTAA ATTTCTCGAG GAATACGGAA TAGATCGGAG TCACGTCGCT ATCCACAACT GGGTTCATAA AGCCGATCGA CAGCCGATCT CGACCGTCTC TGTGGATCAA CTCGCGGTTG ACGAAACGAT GATCCGTCTC CACGGTCAGC AATTCTGGCT GTACGGCGCG GTTGATCCGT ATACGAACGA AATTTTTCAC GTAAGCCTCT ATCCGACCGC AACGAAACAG ACAGCGCGCT GGTTTCTGAC CGAGCTACAC CGGCGCTACC AGCTCGATGA TGTGAAATTT CTCGTCGATG ACGTAGACTA TCTTGGACCA GTTCTTGCTG AGGATGGGTG TCGATTTCAA ATCATTCAAC ATGGAAATCG GAATGCTATC GAACGTGTCT TTTGGGAAAT AGAATGA
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Protein sequence | MSEFDRLNDG IAWIDLSFVE RDRTPLCAIE VGIRCHLAGM SLCEVSKFLE EYGIDRSHVA IHNWVHKADR QPISTVSVDQ LAVDETMIRL HGQQFWLYGA VDPYTNEIFH VSLYPTATKQ TARWFLTELH RRYQLDDVKF LVDDVDYLGP VLAEDGCRFQ IIQHGNRNAI ERVFWEIE
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