Gene Hlac_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0923 
Symbol 
ID7401295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp921690 
End bp922226 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content50% 
IMG OID643707989 
Producttransposase 
Protein accessionYP_002565591 
Protein GI222479354 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.134513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000447966 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCAGAAT TCGACCGCCT CAACGATGGT ATCGCGTGGA TTGACTTGTC GTTTGTGGAG 
CGAGATCGAA CGCCGCTCTG TGCGATTGAA GTAGGGATCC GCTGTCACTT GGCCGGTATG
TCACTATGCG AGGTGAGTAA ATTTCTCGAG GAATACGGAA TAGATCGGAG TCACGTCGCT
ATCCACAACT GGGTTCATAA AGCCGATCGA CAGCCGATCT CGACCGTCTC TGTGGATCAA
CTCGCGGTTG ACGAAACGAT GATCCGTCTC CACGGTCAGC AATTCTGGCT GTACGGCGCG
GTTGATCCGT ATACGAACGA AATTTTTCAC GTAAGCCTCT ATCCGACCGC AACGAAACAG
ACAGCGCGCT GGTTTCTGAC CGAGCTACAC CGGCGCTACC AGCTCGATGA TGTGAAATTT
CTCGTCGATG ACGTAGACTA TCTTGGACCA GTTCTTGCTG AGGATGGGTG TCGATTTCAA
ATCATTCAAC ATGGAAATCG GAATGCTATC GAACGTGTCT TTTGGGAAAT AGAATGA
 
Protein sequence
MSEFDRLNDG IAWIDLSFVE RDRTPLCAIE VGIRCHLAGM SLCEVSKFLE EYGIDRSHVA 
IHNWVHKADR QPISTVSVDQ LAVDETMIRL HGQQFWLYGA VDPYTNEIFH VSLYPTATKQ
TARWFLTELH RRYQLDDVKF LVDDVDYLGP VLAEDGCRFQ IIQHGNRNAI ERVFWEIE