Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0920 |
Symbol | |
ID | 7401292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 917584 |
End bp | 919551 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643707986 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002565588 |
Protein GI | 222479351 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.301008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000022653 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACCGATT ACCTACAGAA ACGAGGCTCA GAACAGTACG ACCGGCTTGC CACACGCATC GGTCACGCAG TTGCCCAGTA CCGAACGGAA CACGAACTGC GAGAACGAGT GAAAGAACTC ACTGCAATTC AAACGATCAG CGATCTACTC ACCGACAGTG ACGGCCAGCT GGCAGGGCAA CTCCAGCAAG TCGTTACGTA CCTTTCACAG TCTCTCCAGT TCACAGAAGC GGCAGTTGCT TCGCTCTCTA TCGATGAGAC CGAGTTCACC TCTCCGGAGT ACGAACCACC AGTTCACCAA CTCTCAGTCC AAGACGTGAC CACCGCCGGT AATGAACTCA CACTTATAAT TGGCTATACG ATCGACTCAG TGTCAGAAAC CGATGGTGAT GTGTTTCTCC CCGAAGAACG AGAGCTAATC ACCACGGTTC TACAGCTCGT CACGGCCTAC CTTGATCGGC GACACGTCCT CTCAGATCTC CAAGAGGCAG AGCGTCGGCT CAATCTCATT CTCGACAATA CGACCGCAGT GATGTATCTG AAAGATACTG AGGGTCGATA TGTGTTTGTG AATGCCGAAT ACGAGCGGTT GTTCAATGTG GACTCCGAGG AGCTCATCGG ACAGTACGAT GCGGATATCC ACCCGCCGGA CATGGCCGAA ACCGTCCAGG CGAACGATCG TCGTGTCCTC GAAACAGGCG AACCGATTGA GACTGAAGAA CAAATCACGG TGGATGGTGA CGAGCGAACG TATCTCTCAT TGAAAGTCCC TGTGCTGGAT GCTGCTGGTG AAGTGGAGGG CGTGTTCGGC GTATCCACAG AAATCACCGA ACGTAAAGAA CGAGAACGGC AACTCGAAGC ACTCAATCGA GAGATACCAC GGTTATTGTC CGCTGAGACG ATCGAGGAAG TAGCCGAACT CGGGGTTGTC GCCGCTCATG AGATCTTGGA TCTACAGGCG AATGCGATTC ACCTGTACGA CGCGGAGAAC GAGGAACTGG CACCTGTTGC ATACACTGAT GGTGTTCTGG AGCTCATCGG TGACCCCCCG ACGTTTCGTG ACGGACAGAG TATCGCGTGG CGGGTGTTTG CGGATGGAAA CGCGACAGCG ATTGATGATA TCCAGACTGA CACAGATATC TACAACCCGG AGTCACCGAT TCGCAGCGAG TTGTACCTCC CGCTGGGTGA GTATGGTATC TTGATGGCCG GGTCACCAAC GCCCTCGAAG TTCGATTCAC AAGACGTAAC CGTTGGTGAA CTACTTACCG CCCATCTTAC CACTGCACTC TCCCAGGTCA CCACCGAACA GGAGTTACGT GAGCGAGAAG CGGAGTTAGA AGCCCAAAAC GAACGGCTCG AACAGTTTGC CAGTATGGTC TCACACGATT TACGCAATCC GTTATCAGTT GCGTCCGGAA ACTTGGAATT ATATCGGGAA ACCGGTGAGG AATCCCGTTT AGAAACGATT GATACGGCTC TCACCCGCAT TCAGGAGCTC ATTACCGATC TTACCTCACT CGCACGTTAT GGCATCCCCG ACGAAAACCA CGAACTAGTG TCGGTGTCTG AGGTGGCCCG CGACGCATGG GAGTTGATAG ACACGCGGTC AGCAACCCTG TCAACGGAAC CGTGCACAGT AACTGGCGAC GCAAGCCAGA TCACGACACT CTTCGAAAAT CTGTTCCGGA ATGCGGTCGG GCACGGTGGC CCAGACGTGA CTGTCCGGGT CGGACCGCTT GAAAACGGGT TCTACGTTGA AGATACCGGT GACGGTATTC CCCCTGACGA ACGTGACACC GTGTTTGATC ACGGTTATAC GACAGGCTAC AGCGGAAGCG GTATCGGACT CACAATTGTC TCACGAATTG CCCAAGCTCA CAGCTGGGAC GTTACCCTTA CAGACAGCAC GGAAGGCGGC GCACGGTTCG AGTTCCGAGC GACATGTTCA GATGATCCGG ATAACTAA
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Protein sequence | MTDYLQKRGS EQYDRLATRI GHAVAQYRTE HELRERVKEL TAIQTISDLL TDSDGQLAGQ LQQVVTYLSQ SLQFTEAAVA SLSIDETEFT SPEYEPPVHQ LSVQDVTTAG NELTLIIGYT IDSVSETDGD VFLPEERELI TTVLQLVTAY LDRRHVLSDL QEAERRLNLI LDNTTAVMYL KDTEGRYVFV NAEYERLFNV DSEELIGQYD ADIHPPDMAE TVQANDRRVL ETGEPIETEE QITVDGDERT YLSLKVPVLD AAGEVEGVFG VSTEITERKE RERQLEALNR EIPRLLSAET IEEVAELGVV AAHEILDLQA NAIHLYDAEN EELAPVAYTD GVLELIGDPP TFRDGQSIAW RVFADGNATA IDDIQTDTDI YNPESPIRSE LYLPLGEYGI LMAGSPTPSK FDSQDVTVGE LLTAHLTTAL SQVTTEQELR EREAELEAQN ERLEQFASMV SHDLRNPLSV ASGNLELYRE TGEESRLETI DTALTRIQEL ITDLTSLARY GIPDENHELV SVSEVARDAW ELIDTRSATL STEPCTVTGD ASQITTLFEN LFRNAVGHGG PDVTVRVGPL ENGFYVEDTG DGIPPDERDT VFDHGYTTGY SGSGIGLTIV SRIAQAHSWD VTLTDSTEGG ARFEFRATCS DDPDN
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