| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0912 |
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| Symbol | |
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| ID | 7401283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 904780 |
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| End bp | 909483 |
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| Gene Length | 4704 bp |
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| Protein Length | 1567 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643707977 |
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| Product | ferredoxin-dependent glutamate synthase |
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| Protein accession | YP_002565580 |
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| Protein GI | 222479343 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00362249 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAGC CACGTAGTAA CACCCGGGAG GTATCGGAGC GGGATCTCTC GGGCCACGGT
GGGGGGCTTG CGGCAGTAAC GGACGAGCGT TCGAACTGCG GGATCGGCGG AATCGTTGAT
CTCGACGGCG ATCCGAGCCA CGGAACGGTG GCCGACGCCG TCGAACTGCT CGAGAACCTC
GAACACCGCG GTACGACGGG CGCCGAGGAG AACACGGGCG ACGGCGCCGG CATCATGGTC
GCGCGCCCCG ACGACTTCTT CCGCGAGGTC GTCGACGCCG ATCTGCCCGA GGTGTACGCC
GTCGGCTCCG TGTTCATGCC GACCGAACCG AGCGTGCAGG CCGAGATCCA CGACGTTATC
GCGGAGGTGT TCTCCGTGTA CGGACTGGAG GTCTTGGAGT GGCGCTCTGT CCCGACGGAC
AACGCGGATC TGGGCGCGAC CGCGCTCGAC TCCGAACCGG AGGTCGCCCA GCTGTTCGTC
GCGCCCGTCG AGGGCGCCGG CCTCGCAGAG CGGTTCACCA GCGAGGAGAC GCGCCCCGAC
GACGCCGACC CGGAGATCCT CGGCTTCGAT CGCGCGCTGT ACGCCGCGCG CCGCGAGATC
GAGAACGCGG TGTCCGACAT CGACGGCGCC GGCCGGTTTT ACGTCTGCTC GCTCGACCGC
CAGCGCGTCG TGTACAAGGG CCTCCTCAAG GGCTCGCAGC TCGCCGGCTA CTATCCGGAC
CTGACCGACG AGCGCTTCGC GAGCCACGTC GCCTTGGTCC ACGCGCGCTT CTCGACGAAC
ACGCTCGGCG CGTGGCACCT CGCGCACCCG TACCGCAACA TCGTCCACAA CGGCGAGTTC
AACACGATCC GCGGGAACGT CAACTGGATG CGCGCCCGCG AGAACGACCT CGATCACCCG
GCGTTCGGTG CGGAACTCGA CACGATCAAG CCGGTGATCG ACGATCCCAA CCAATCGGAC
ACCGCGAGCG TCGACAACGC GGTCGAGCTC CTCTTGCAGG CCGGCCGCGA CCTCCCGCAC
ACCCTCCGGA TGCTGATCCC GGAGGCGTTC CGCGACGACG ACCTGATGGA GCAGGCTCGC
GCAGATTTCT ACGACTACCA CGCCTCGCTC GTCGAGCCGT GGGACGGCCC CGCGCTCGTC
ATCGGCTTCG ACGGCGACCG CGTCGCCGGC GTCCTCGACC GCAACGGGCT CCGCCCGTGC
CGGTACGAGG TAACCGAGGA CAATCGACTC GTGGTCGGCA GCGAGGTCGG CGCGCTCCCG
ACCGAGCCAG CGGACGTGCG GCGCCGCGGC CGGCTCCAGC CGGGTGAGAT CTTCGTCGCC
GACCCCGAGC AGGGGCGGAT CGTCCCCGAC GACGAGGTGT TCGACGACCT CACCGACGAG
AAGTACGGCG AGTGGGTCGC CGAGCGGCAG GTCGCCCTCG ACGAGATCGT CGAAGAGGAC
GATGTCGCCG CCGGGGTCGA GTCAGAATCC GACGATAGCG ACGACACCGG CGAAGACGGC
GACGCCGAGC CCACCGTGCG AGCCCACCAA GCCGCGTTCG GCTACACCAC CGACTCGCTG
GACCATCTCG TCGAACCGAT GGCGAGAGAC GGAAAGGACC CGGTCGGTTC GATGGGCGAC
GACACCCCGC TGTCGGTGCT CGCCGATGTC GACCGCCCGC TGTTCACCTA CTTCAAACAG
CTGTTCGCGC AGGTGTCGAA CCCGCCGATC GACTATATCC GCGAGGAGCT CGTCACCTCG
CTGGAGACCC GGATCGGCAA CCAGCGCAAC CTGCTGGACG AGACGCCCGA ACACGCCGAG
CAGATCGTCT CCGACACCCC CGTGCTCACC GACGCGGAGA CGGCCGCGCT GCGCGAACTC
CCTGGCCCGG GCGAACGCGA GCCGGCCGAC AGAAAGGGCG ACGAGCCGGA CGCGTCGTCG
TTCACCTCGG TAGTCGTCGA CGTGACGTAC GACCGCGACG GGTCGCTGGT CGACGCGGTG
AATCGAATCC GTGAGGACGC CGCGACCGCA ATCGAGGACG GCGCCGACGC CGTGGTCCTC
TCGGACCGGG CGGTCGGGAC GGACCGACTC GCGGTGCCGA GCCTGCTCGC GACCGGCGCG
GCTCACCACC ACCTCGTCCG CAACGGGCTG CGGAACCGCG CGGGGCTCGT CGTCGAGTCC
GGCGAGCCGC ACGAGGTCCA CCACCTCGCG ACGCTAGTCG GGTACGGCGC GGACGCGGTC
GACCCGTACC TCGCGTACGC CTCCATCGCC GACGTTGTCG CCGGCCCCGA CGGCGCTGAC
GAGGACGAGG CGCTGGCCGC CTACCGGCAC GCGCTGGAGG ACGGCCTCCT CAAGACGATG
GCGAAGATGG GCATCTCGAC GATGGAGTCG TACCAGGGCG CGCAGATCTT CGAGGCCGTC
GGGCTCTCGT CGTCGTTCGT CGCCGAGTAC TTCGAGGGCA CCGAGATCCG CACCGAGGGG
ATCGGTATCG GAGAGATCGA AGACGACCTC CGGACGCGCC ACGCGATGGC GTTCGGCGCC
GACCCCGAAC TGGAGACCAC CGGCGAGTAC GAACACCGCT CGTCGGGGAT CAAACACGGC
TGGAACCCGC AGACGGTCGG GACGCTCCAG CAGGCGGTCC GGGGCGGCGA CTACGAGCAG
TACCAAGAGT TCGCGGAGTT GGTCAACGAC GAGTCCGAGA AGCTACAGAC CCTGCGCGGA
CTCTTGGAGT TCGAGTCCGA CCGTGACGCC GTCCCGGTCG AGGAGGTCGA ACCGGTCGAG
TCGATCGTCG AGCGCTTCTC GACGGCCGCG ATGAGCCTCG GAAGCATCTC GCCCGAAGCC
CACGAGAACA ACGCGATCGC GATGAACCGG CTCGGCGCGA AGTCGAACAC GGGCGAGGGC
GGCGAGCCTC CGGAGCGATT CGGCACCGAA AAGGAGTGTA ACGTCAAGCA GGTCGCGTCC
GGCCGGTTCG GCGTCACCTC CGAGTACCTC GCGAGCGCAG ACGAGCTGCA GATCAAGATG
GCACAGGGGT CGAAGCCCGG CGAGGGCGGC CACCTCCCCG GCAAGAAGGT CAACGAGATG
ATCGCGCACG TCCGGTGTTC CACTCCCGGT GTCGGGCTCA TCTCGCCGCC GCCACAACAC
GACATCTACT CGATCGAGGA CCTCAAGCAG CTCATCTTCG ATCTGAAGGC TGCGAGTCCC
GACGCCGATG TCAACGTGAA GCTGGTCTCC GAGGCCGGAA TCGGTACCAT CGCGGCCGGC
GTCGCGAAGG CGAACGCCGA CGTGGTGCAC GTCTCCGGCC ACGACGGCGG GACCGGTGCC
TCACCGAAGA CATCGATCAA GAACGCTGGG CTTCCGTGGG AGCTCGGGCT TGCGGAGGCG
AACCAGATGC TCCGCGCGAC CGGCCTCCGG GACCGCATCC GCGTGACGGC CGACGGCGGG
CTCAAGACCG GGCGCGACGT GGCGGTCGCC GCCGCGCTCG GCGCCGAGGA GTACGTGTTC
GGCACCGCGT CGCTCGTCAC CGCCGGCTGC GTGATGGCGC GACAGTGCCA CGAGAACACC
TGTCCCGTCG GCGTCGCGAC CCAGCGCGAG GACCTCCGCC AGCGCTTCCC CGGCCAGCCG
GACCACGTCA TCAACTACAT GACGTTCATC GCGCAGGAGC TCCGCGAACT CATGGCCGAC
CTCGGGTACA CCGAGGTCGA GGAGTTCATC GGCCGGCCCG AGCTCCTCTC GCAGCGCGAG
ACCGACCACG AGAAGGCCAA ACACCTCGAC CTGTCGGCGG TCATCGCCGA GCCCGCGGGC
GACGCCCGCA CGAAGACCCG CGAGCAGGAC GACGCCGACA TCGACGACCT GCTCGACTGG
GATCTCATCG AGGAGGCGAG CCCGGCCATC GAGGACGGCG CGCCCGTCGC GCTCACCCGC
GACGTGGAGA ACGTCGACCG CGCAATCGGC GCAACCCTCT CGAACCGGAT CGTCTCCGAA
CACGGCGGTG ACGGGCTCCC GGACGACACC GTCACTTGTC GGTTCGACGG CTACGCGGGC
CAGAGCTTCG GCGCGTTCCT CGCGCCGGGG ATCACCATGG AGCTGTCCGG CGCAGCCAAC
GACTATGTCG GCAAAGGCCT CTCCGGCGGC CGGATCGTGA TCAACACGCC CGAGGAAGCC
GGCTACGACC CCGCCGAGAA CGTCGTCGCC GGCAACGTCG GACTGTACGG CGCTACCGCG
GGCGAGGTCT ACGTCAACGG CGTCGCCGGC GAGCGGTTCG GCGTCCGCAA CTCCGGCGTG
AAGGCCGTCG TCGAGGGCGT GGGCGACCAC GGCTGCGAGT ACATGACCGG GGGCGCCGTC
GCCGTGCTCG GCGACACCGG GCGAAACTTC GCGGCCGGGA TGTCCGGCGG CGTCGCGTAC
GTGTACGACC CTGACGACCG GCTCGACGCC CGCGTGAACC GCGGAATGGT GTCGCTCTCG
GAGACCCTCG ATGAGTCCGA CGAACGCATG CTCCGCCGGC TCGTCGAGAA CCACCGCGCG
TACACCGACA GCGACCGGGC GGCCGAGCTG CTCGACGACT GGGCGGCCGC GCTCGACGAC
TTCGTGCGCG TCTTCCCCGA CGCCTACGCC GAGGTCATCG CCGAGGGCAC GGGCGCCGAC
GTACGCGAGG AGCTGCCGGA ACCCGCCGCC GCGGTTCCCG GCTCCGCGTC CGACGCGACC
GAGCAGGCGT CGAGCGACGA CTGA
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| Protein sequence | MTEPRSNTRE VSERDLSGHG GGLAAVTDER SNCGIGGIVD LDGDPSHGTV ADAVELLENL
EHRGTTGAEE NTGDGAGIMV ARPDDFFREV VDADLPEVYA VGSVFMPTEP SVQAEIHDVI
AEVFSVYGLE VLEWRSVPTD NADLGATALD SEPEVAQLFV APVEGAGLAE RFTSEETRPD
DADPEILGFD RALYAARREI ENAVSDIDGA GRFYVCSLDR QRVVYKGLLK GSQLAGYYPD
LTDERFASHV ALVHARFSTN TLGAWHLAHP YRNIVHNGEF NTIRGNVNWM RARENDLDHP
AFGAELDTIK PVIDDPNQSD TASVDNAVEL LLQAGRDLPH TLRMLIPEAF RDDDLMEQAR
ADFYDYHASL VEPWDGPALV IGFDGDRVAG VLDRNGLRPC RYEVTEDNRL VVGSEVGALP
TEPADVRRRG RLQPGEIFVA DPEQGRIVPD DEVFDDLTDE KYGEWVAERQ VALDEIVEED
DVAAGVESES DDSDDTGEDG DAEPTVRAHQ AAFGYTTDSL DHLVEPMARD GKDPVGSMGD
DTPLSVLADV DRPLFTYFKQ LFAQVSNPPI DYIREELVTS LETRIGNQRN LLDETPEHAE
QIVSDTPVLT DAETAALREL PGPGEREPAD RKGDEPDASS FTSVVVDVTY DRDGSLVDAV
NRIREDAATA IEDGADAVVL SDRAVGTDRL AVPSLLATGA AHHHLVRNGL RNRAGLVVES
GEPHEVHHLA TLVGYGADAV DPYLAYASIA DVVAGPDGAD EDEALAAYRH ALEDGLLKTM
AKMGISTMES YQGAQIFEAV GLSSSFVAEY FEGTEIRTEG IGIGEIEDDL RTRHAMAFGA
DPELETTGEY EHRSSGIKHG WNPQTVGTLQ QAVRGGDYEQ YQEFAELVND ESEKLQTLRG
LLEFESDRDA VPVEEVEPVE SIVERFSTAA MSLGSISPEA HENNAIAMNR LGAKSNTGEG
GEPPERFGTE KECNVKQVAS GRFGVTSEYL ASADELQIKM AQGSKPGEGG HLPGKKVNEM
IAHVRCSTPG VGLISPPPQH DIYSIEDLKQ LIFDLKAASP DADVNVKLVS EAGIGTIAAG
VAKANADVVH VSGHDGGTGA SPKTSIKNAG LPWELGLAEA NQMLRATGLR DRIRVTADGG
LKTGRDVAVA AALGAEEYVF GTASLVTAGC VMARQCHENT CPVGVATQRE DLRQRFPGQP
DHVINYMTFI AQELRELMAD LGYTEVEEFI GRPELLSQRE TDHEKAKHLD LSAVIAEPAG
DARTKTREQD DADIDDLLDW DLIEEASPAI EDGAPVALTR DVENVDRAIG ATLSNRIVSE
HGGDGLPDDT VTCRFDGYAG QSFGAFLAPG ITMELSGAAN DYVGKGLSGG RIVINTPEEA
GYDPAENVVA GNVGLYGATA GEVYVNGVAG ERFGVRNSGV KAVVEGVGDH GCEYMTGGAV
AVLGDTGRNF AAGMSGGVAY VYDPDDRLDA RVNRGMVSLS ETLDESDERM LRRLVENHRA
YTDSDRAAEL LDDWAAALDD FVRVFPDAYA EVIAEGTGAD VREELPEPAA AVPGSASDAT
EQASSDD
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