Gene Hlac_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0909 
Symbol 
ID7401280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp900234 
End bp900902 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID643707974 
Producthypothetical protein 
Protein accessionYP_002565577 
Protein GI222479340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00627368 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACAGAC GCGGACTGCT CGCGGCCATC GCCGCATCGA CATCCGTCGC GGTCGCCGGG 
TGCGCCGGCG GCGAGAACGG CAGCTACGAG TTCGACGCCG AACCGGCCAG CGTTCCGTCC
TCAGCCGCGT CCGAGGCGGG GTACGAGGGA GAGGAACCGA AGCCGTTCAC CATCGAACAG
GAGTTCGACG TGGCCGGCGT GAACGCGCAG GTGTCCGCGA CCACGTGGGC CGCCGGGTAC
GAGAACTCCG AGAACGGGTC AGCGCTGTTC GTGGCGAGCA CGCCGAACGC GTCGGTGGGC
GGGCAGTCGG TCAACCCGCT CGTCCGCGCG GACGACGCCG AGCTGATCCG ACGGCTGTTA
GAGCAGGTGG ATCAGCGCGG GATCGGCGGT GAAGGCACCG ACATCGAGGC GAGCAATATC
GAAAATCGGG GGTCAGAGAC CCGAACTATC CTCGGTGAGG AGGTGGAGAT CTCGATCCTC
GAAACGACCA TCGACGCAGA GGTCGACGGC GGTGGCGGAG AGAGCGGCAC GGTCGAGGAC
GTTCCGGTGT ACCTGTACGT CGGGACGGTC CAACACGGGG AGGACGTGAT CGCACTCGTC
GGCGTCCACC CCACCGCCGT CGACGCCTCC GAGTCGCTGC TCTCCCTGAT GGAACAGGTC
GAACACTAA
 
Protein sequence
MHRRGLLAAI AASTSVAVAG CAGGENGSYE FDAEPASVPS SAASEAGYEG EEPKPFTIEQ 
EFDVAGVNAQ VSATTWAAGY ENSENGSALF VASTPNASVG GQSVNPLVRA DDAELIRRLL
EQVDQRGIGG EGTDIEASNI ENRGSETRTI LGEEVEISIL ETTIDAEVDG GGGESGTVED
VPVYLYVGTV QHGEDVIALV GVHPTAVDAS ESLLSLMEQV EH