Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0909 |
Symbol | |
ID | 7401280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 900234 |
End bp | 900902 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643707974 |
Product | hypothetical protein |
Protein accession | YP_002565577 |
Protein GI | 222479340 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00627368 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCACAGAC GCGGACTGCT CGCGGCCATC GCCGCATCGA CATCCGTCGC GGTCGCCGGG TGCGCCGGCG GCGAGAACGG CAGCTACGAG TTCGACGCCG AACCGGCCAG CGTTCCGTCC TCAGCCGCGT CCGAGGCGGG GTACGAGGGA GAGGAACCGA AGCCGTTCAC CATCGAACAG GAGTTCGACG TGGCCGGCGT GAACGCGCAG GTGTCCGCGA CCACGTGGGC CGCCGGGTAC GAGAACTCCG AGAACGGGTC AGCGCTGTTC GTGGCGAGCA CGCCGAACGC GTCGGTGGGC GGGCAGTCGG TCAACCCGCT CGTCCGCGCG GACGACGCCG AGCTGATCCG ACGGCTGTTA GAGCAGGTGG ATCAGCGCGG GATCGGCGGT GAAGGCACCG ACATCGAGGC GAGCAATATC GAAAATCGGG GGTCAGAGAC CCGAACTATC CTCGGTGAGG AGGTGGAGAT CTCGATCCTC GAAACGACCA TCGACGCAGA GGTCGACGGC GGTGGCGGAG AGAGCGGCAC GGTCGAGGAC GTTCCGGTGT ACCTGTACGT CGGGACGGTC CAACACGGGG AGGACGTGAT CGCACTCGTC GGCGTCCACC CCACCGCCGT CGACGCCTCC GAGTCGCTGC TCTCCCTGAT GGAACAGGTC GAACACTAA
|
Protein sequence | MHRRGLLAAI AASTSVAVAG CAGGENGSYE FDAEPASVPS SAASEAGYEG EEPKPFTIEQ EFDVAGVNAQ VSATTWAAGY ENSENGSALF VASTPNASVG GQSVNPLVRA DDAELIRRLL EQVDQRGIGG EGTDIEASNI ENRGSETRTI LGEEVEISIL ETTIDAEVDG GGGESGTVED VPVYLYVGTV QHGEDVIALV GVHPTAVDAS ESLLSLMEQV EH
|
| |