Gene Hlac_0891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0891 
Symbol 
ID7401262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp883950 
End bp885845 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content67% 
IMG OID643707956 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_002565559 
Protein GI222479322 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0640881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG ACGAACTCAT CTGGCGGATA TCGGGGGGAT CCGGTGACGG GATCGCTTCG 
ACCAGCCAGA ACTTCGCGAA GGCCTTGATG CGATCGGGGC TCAACGTCTT CACGCATCGC
CACTACCCGT CGCGGATCCG CGGGGGCCAC ACCTACACCG AGATCCGAGC GTCTTCGGAT
CCGGTGAAAT CCCGCGGGGA CGGCTACAAC TTCCTGCTCG CGCTCGGCGA CTCGTTCGCC
CGCAACCCGC AGGAAGAGGC CATCTACGGG AACGAAGAGA TCAAGCCGCT CTCGGAGAAC
TTGGACGAAC TCCGCGAGGG CGGGGTCATC GTGTACGACG AGGGGCTCCT CGACGCCTCC
GAGATTCCGG ACTTCGAGGA GCGCGTAGAG GAGAACAACT GGCACGTATA CTCCCTCGAC
CTCCGCGGAC TCGCGCGCGA TCAGGGCCGC GAGGTCATGC GCAACACCGC CGGCGTCGGC
GCGACCTGCG CGATCACCGG GATGGACCTC GACCACGTCC AGGACCTCAT GCGCGACGCG
ATGCCGGAGA AGATCCTCGA GCCGAACCTC GAGATCCTCC AGATCGCCTA CGACCAGGTC
CGCGAGGAGT ACGACGTGGA CGCCTCGGAC GTGTCGGTGC CGACCGGCGA ACACGACGAG
ACGCAGCTGC TCATGTCCGG CTCGGACGCC ATCTCCTACG GCGCCATCGA CGAGGGCTGC
CGGTTCATCG CCGGCTACCC GATGACGCCG TGGACCGAGG TGTTCACCAT CATGACGAAG
AACCTGCCGA AGCTCGGCGG GATCTCCGAG CAGGTCGAAG ACGAGATCGC GGCGGCCGCG
CTCGCGGTCG GCGCCTCGCA CGCCGGCGTA AAGGCCATGT CCGGCTCCTC CGGCGGCGGC
TTCGCGCTGA TGTCGGAGCC GCTCGGGCTC GCGGAGATGA CGGAGACTCC CGTCGTCCTC
GTTGAGGCCA TGCGCGCCGG TCCCTCGACC GGGATGCCGA CGAAGCCGGA GCAGTCCGAC
CTCGAACACG TCCTGTACAC CTCACAGGGC GACTCCCAGC GCGTCGTCTT GGCGCCCGGG
ACCGTCGAGG AGGCGTACGA GCAGTCGCGA ATCGCCTTCC GGCTGGCCTA CGAGTACCAG
ATCCCGTCGA TCCTCCTGTA CGACCAGAAG CTCGGCGGCG AGCTGGTGAA CGTCCCGAAG
AGCCACTTCG ACCGCGAGCC GAACCCGACC CTCGGGAAGA CGCTCTCGGA GGACGCGCTG
GCCGACGAGC CGCACTCGGC CGACGGGAAG TTCCACCGGT TCCAGCACGA CGTCGAGGAC
GGCGTCTCCC CGCGGTCGAT CCCCGGCCAG AAGGGCGGCC GCTACCTCGC GACCGGCAAC
GAACACGACC CCACCGGCCA CATCTGCGAG GACGCGGACA ACCGCGTCGC GCAGATCGAC
CGCCGGACCC AGAAGCTGGA GGCGATCCGA GCCGACCTCG ACACCGAGGA CACCGGCTCG
TACGCCGGTC CCGACGACGC TCAGTACGGT ATCCTCACGT TCGGCAGCCA GCAGGGCACC
GTCGAGGAGG CGGTCGGCCG GCTCAACGAC GACGGAATTT CGGTGAAATC GTACGGCGTC
TCCGACATGC TTCCGTTCCC GACGGAGCAG GTCGAGGCGT TCGTCGAGAG CGTCGACGAG
GTCCTCGTCG TCGAGATGAC GGCGTCCGGA CAGTTCCGCG GGCTCATCCA GAAGAACCTC
GGCCGCTACG GCGAGAAGCT GTCGAGCCTG TTGAAGTACA ACGGGAACCC GTTCGAGCCG
GCGGAGATCG TCGACGGGTT CGAGGCCGCG ATCATCGAGG GCGACGGCGA TGCGTCCGGC
CATCAGACCA CCTTCGTCCC AGCCGCAGGT GACTAA
 
Protein sequence
MTDDELIWRI SGGSGDGIAS TSQNFAKALM RSGLNVFTHR HYPSRIRGGH TYTEIRASSD 
PVKSRGDGYN FLLALGDSFA RNPQEEAIYG NEEIKPLSEN LDELREGGVI VYDEGLLDAS
EIPDFEERVE ENNWHVYSLD LRGLARDQGR EVMRNTAGVG ATCAITGMDL DHVQDLMRDA
MPEKILEPNL EILQIAYDQV REEYDVDASD VSVPTGEHDE TQLLMSGSDA ISYGAIDEGC
RFIAGYPMTP WTEVFTIMTK NLPKLGGISE QVEDEIAAAA LAVGASHAGV KAMSGSSGGG
FALMSEPLGL AEMTETPVVL VEAMRAGPST GMPTKPEQSD LEHVLYTSQG DSQRVVLAPG
TVEEAYEQSR IAFRLAYEYQ IPSILLYDQK LGGELVNVPK SHFDREPNPT LGKTLSEDAL
ADEPHSADGK FHRFQHDVED GVSPRSIPGQ KGGRYLATGN EHDPTGHICE DADNRVAQID
RRTQKLEAIR ADLDTEDTGS YAGPDDAQYG ILTFGSQQGT VEEAVGRLND DGISVKSYGV
SDMLPFPTEQ VEAFVESVDE VLVVEMTASG QFRGLIQKNL GRYGEKLSSL LKYNGNPFEP
AEIVDGFEAA IIEGDGDASG HQTTFVPAAG D