| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0874 |
|---|
| Symbol | |
|---|
| ID | 7401244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 863047 |
|---|
| End bp | 863766 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643707939 |
|---|
| Product | acetolactate synthase, small subunit |
|---|
| Protein accession | YP_002565542 |
|---|
| Protein GI | 222479305 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
|---|
| TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG ACTCCCCCGA CTCCCGGCCC GCGACCGATG GCGGCTCCCC CGCGTCCGGC
GGCGTGCCCG AGGCCGACTC GCGACCCATG CCGAGCGAAC AGCCCGGCCC CGAGGAGCGC
AACTATCCCA CGGGACGCCG GAACCTCGAA GGGATCCGCA TCGACCCGGT CGTCGAGGCG
GAACACGAGT CTCGCCGCGC AGTCATCTCG GCGTTGGTGG AAGATGAGCC GGGCGTGCTC
GCGCGCGTCT CCGGTCTCGT CTCCCGCCGA CAGTTCAACA TCGAGAGCCT CACTGTCGGC
CCGACGACCG TGGAGGGTCA CTCGCGGATC ACCATGGTCG TCGAGGAGAC GGACCCCGGC
ATCGACCAGA TCGAAAAGCA GATGGCGAAG CTAAAGCCGG TCATCTCGGT CGGCGAGGTC
TCCGGCGACG CGGTCACCTC GGAGCTCGTC CTGCTCAAGG TGCAGGCGGA CGACCCTGCA
GCGGTCCACG CGGTCTCGGA GATGTACGAC GGCCGGACGG TCGACGCCGG TCCGGAGACG
ATCACCGTCG AGCTTACCGG CGACAACGCC AGCATCGACA ACGCGATCGG CGCGTTCGAG
CGGTTCGGCA TCGTCGAGAT CGCGCGCACC GGGCCGACCG CCCTCGCGCG CGGCAACACG
CCGACGGCGC CCGGAGAGAA ACCCGGAACG GCCGGCGAAC CGACGACTCA CGACGACTGA
|
|---|
| Protein sequence | MSGDSPDSRP ATDGGSPASG GVPEADSRPM PSEQPGPEER NYPTGRRNLE GIRIDPVVEA
EHESRRAVIS ALVEDEPGVL ARVSGLVSRR QFNIESLTVG PTTVEGHSRI TMVVEETDPG
IDQIEKQMAK LKPVISVGEV SGDAVTSELV LLKVQADDPA AVHAVSEMYD GRTVDAGPET
ITVELTGDNA SIDNAIGAFE RFGIVEIART GPTALARGNT PTAPGEKPGT AGEPTTHDD
|
|---|
| |