Gene Hlac_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0868 
Symbol 
ID7401238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp857705 
End bp858244 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID643707933 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002565536 
Protein GI222479299 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCC CGACGCCACA GGACCTCCGC GAGCGGCGGA CGACGCTGGA GCTGACCCAG 
AGCGATTTGG CGGACGCCGC CGATGTCTCG CAGCCCCTCA TCGCGCGGAT CGAGGGCGGC
GACGTCGATC CGCGACTCTC GACGCTTCGG CGTATCGTCA ACGCGCTCCA AGAGGCGGAA
GGGAAAGTCG TTCGCGCGAG CGACCTGATG AACGAGACGG TGATAAGCGT CGCGCCCGAC
GACGCGGTGC ACGGGGCGGT CGAGCTGATG GAAGAGGAGG CGTACTCGCA GCTCCCGGTG
CTCCAGAACG GCGTGCCTGT CGGCTCGATC AGTCAGAGCG ACGTGGTCCA CGCCGGCGAG
AACGTGGGCG ACCATCCGGT CAGCGATGTG ATGAGCGAGT CGTTCCCCAC GGTCGCGCCC
GGCGCGACGG TCGACGAGGT TCGGAACTTA CTCGACCACT ACAAGGCGGT GATGGTGACC
GACGGCGGTG AGACGGTCGG AATCATCACC GAGGCCGACA TCGCTGCGCA CCTGTCGTAA
 
Protein sequence
MELPTPQDLR ERRTTLELTQ SDLADAADVS QPLIARIEGG DVDPRLSTLR RIVNALQEAE 
GKVVRASDLM NETVISVAPD DAVHGAVELM EEEAYSQLPV LQNGVPVGSI SQSDVVHAGE
NVGDHPVSDV MSESFPTVAP GATVDEVRNL LDHYKAVMVT DGGETVGIIT EADIAAHLS