Gene Hlac_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0852 
Symbol 
ID7400818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp845316 
End bp846056 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID643707918 
ProductABC transporter related 
Protein accessionYP_002565521 
Protein GI222479284 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.478961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTAA TTGTCGATCT CGACGGCGTG ACGTTCTCCT ACGGCGACAC GGTCGCCGTG 
AGCAACGTCT CTCTGACGGT CGAGGAGGGT GATTTCCTCG GGCTCGTCGG GCCGAACGGC
TCCGGGAAGA CCACCCTGCT TCACCTCATG CTCGGGCTCC ACGAGCCCGA CGAGGGATCC
ATTGAGCTGT TCGGCCGCCC GGTCGACGAG TTCGACGACG GCGGTCGGAT CGGCTACGTC
TCCCAGAAGG CAACGAGCCG GGGCGGCGCG ATGCCGGTCA CCGTCCGCGA GTGCGTCACC
ATGGGCCGGT TCGCGCGCGC CGGCCGAGGG CGGCTCTCCG CGGCCGACCG TGCCGCTGTC
GCCGACGCGA TCGAGACGGT CGGCATCGGC GAACTCGCCG ACCGACTCGT CTCGGAGCTG
TCCGGCGGCC AGAAACAGCG AGCATACATC GCGCGTGCCT TGGCGAGCGA CGCAGATCTA
CTCGCGCTCG ACGAGCCGAC CGTCGGCGTC GACGCCGAGT CGCGCGACGC CTTCTACGCC
CTCCTCGACG AGCTGAACGA CGAGGGGATC ACCATCATCC TCATCGAACA CGACATCGGC
GTCGTCACCG ACCGCGCGAA CCGCATCGCC TGTATCAACA CCGAGCTGTA CCACCACGGA
GACACCGAGT CGTTCGTCGA GAGCGACGCC CTCGCGGAGG CGTACGGCAC CACGGGACAG
GTCGTCCACC ACCACCACTG A
 
Protein sequence
MTVIVDLDGV TFSYGDTVAV SNVSLTVEEG DFLGLVGPNG SGKTTLLHLM LGLHEPDEGS 
IELFGRPVDE FDDGGRIGYV SQKATSRGGA MPVTVRECVT MGRFARAGRG RLSAADRAAV
ADAIETVGIG ELADRLVSEL SGGQKQRAYI ARALASDADL LALDEPTVGV DAESRDAFYA
LLDELNDEGI TIILIEHDIG VVTDRANRIA CINTELYHHG DTESFVESDA LAEAYGTTGQ
VVHHHH