Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0852 |
Symbol | |
ID | 7400818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 845316 |
End bp | 846056 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643707918 |
Product | ABC transporter related |
Protein accession | YP_002565521 |
Protein GI | 222479284 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.478961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGTAA TTGTCGATCT CGACGGCGTG ACGTTCTCCT ACGGCGACAC GGTCGCCGTG AGCAACGTCT CTCTGACGGT CGAGGAGGGT GATTTCCTCG GGCTCGTCGG GCCGAACGGC TCCGGGAAGA CCACCCTGCT TCACCTCATG CTCGGGCTCC ACGAGCCCGA CGAGGGATCC ATTGAGCTGT TCGGCCGCCC GGTCGACGAG TTCGACGACG GCGGTCGGAT CGGCTACGTC TCCCAGAAGG CAACGAGCCG GGGCGGCGCG ATGCCGGTCA CCGTCCGCGA GTGCGTCACC ATGGGCCGGT TCGCGCGCGC CGGCCGAGGG CGGCTCTCCG CGGCCGACCG TGCCGCTGTC GCCGACGCGA TCGAGACGGT CGGCATCGGC GAACTCGCCG ACCGACTCGT CTCGGAGCTG TCCGGCGGCC AGAAACAGCG AGCATACATC GCGCGTGCCT TGGCGAGCGA CGCAGATCTA CTCGCGCTCG ACGAGCCGAC CGTCGGCGTC GACGCCGAGT CGCGCGACGC CTTCTACGCC CTCCTCGACG AGCTGAACGA CGAGGGGATC ACCATCATCC TCATCGAACA CGACATCGGC GTCGTCACCG ACCGCGCGAA CCGCATCGCC TGTATCAACA CCGAGCTGTA CCACCACGGA GACACCGAGT CGTTCGTCGA GAGCGACGCC CTCGCGGAGG CGTACGGCAC CACGGGACAG GTCGTCCACC ACCACCACTG A
|
Protein sequence | MTVIVDLDGV TFSYGDTVAV SNVSLTVEEG DFLGLVGPNG SGKTTLLHLM LGLHEPDEGS IELFGRPVDE FDDGGRIGYV SQKATSRGGA MPVTVRECVT MGRFARAGRG RLSAADRAAV ADAIETVGIG ELADRLVSEL SGGQKQRAYI ARALASDADL LALDEPTVGV DAESRDAFYA LLDELNDEGI TIILIEHDIG VVTDRANRIA CINTELYHHG DTESFVESDA LAEAYGTTGQ VVHHHH
|
| |