| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0846 |
|---|
| Symbol | |
|---|
| ID | 7400812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 839013 |
|---|
| End bp | 840800 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643707912 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit D |
|---|
| Protein accession | YP_002565515 |
|---|
| Protein GI | 222479278 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCCGA TCCTCACCTC ACTTCCGCCG TACGTCGTAC TCGCGGCGGC GGCGTTCCTC
GTCCTCGGCC TCCCGCGCCG CGCCGGTCAC GCGGCGGCCG CGCTGGCGAC GGCGTTCACG
TTCGCGCAGG CGGTGCTGCT CGGCGACGGC GGCACGGGCG CGTACGTCGC GACGCAGCTG
TTCGGCTTCG ACGTGATCCT GTTCAACGTC GATCAGTTCT CGTTGCTGAT GGGGGTCGTC
GTCGGCTTCC TCGCGACGGC GGCGGTGCTG TACGCGTACG GCACCGAGGC ACCGAAGTGG
GTGACCGCGT TCGCGCTGAT CTACGTCTCA TCGACGGTCG GGACGATCTA CGCCGGCGAC
TGGCTCACGC TGATCTTCTT CTGGGAGCTG ATGGCCGTCA CCTCGACGCT ACTGGTGTGG
CAGTACGGCG GGAAAGCAGT GCGGGCCGGC TACCGCTACG CCCTGTTCCA CGGGATCGGC
GGGACGTTCC TGCTCGGGGC GGTCGTCGTC CACGGCGCAT CGATGCTCGG GAGCGTGCCG
GCCGGCGAGA TCTTCTTGTT CTCGTCGACA ACCGGGATCC ACGCCTCCGC GACGCTGCTC
GCGGCGATCG GGATCGGCGT CAACTGCGGG TTTATCTTCC TGCACACGTG GCTGCCGGAC
ACCTACCCGC GCCCGCACGT CGCGGCGTCG GTGTTCCTCT CGGTGTTCAC GACGAAGACC
GCGGTGTACG TGATGTACCG CGCGTTCCCC GAGGGCGGCA TGTGGCTCGC GTACCTCGGC
GGGTTCATGG CGGTCTACGG CGCGTTCTTC GCGCTGCTGC AGTACGACCC GCGTCGCCTG
CTATCGTACC ACATTCAGGC GCAGGTCGGC TACATGCTGG CGGGGCTCGG ACTCGCGACG
GCCGTCGGTG ACTTCGCCGT CACCGGCGGG TTCGCGCACC TGTTCAACAA CGTTCTCTAC
AAGAGCCTCC TGTTCATGGC GGTCGGCGTC GTGATCTACC GGACCGGCGT CGAGGACATC
AGGGACATGG GCGGGCTCTG GCGGGTGATG CCGGTCACCT TCCTCGTGTA CCTCGTCGGT
GCGGCGTCGA TTACGGCCGT TCCGGGCTTT AACGGATTCA TCTCGAAGGG GATGGTGATC
GACTCCGCCC ACGAGATCCA CAACTTCGAG CTGCTGTTCG GCGAGGGGCT ACTCTGGTGG
CTACTCATCC TCGGCGGCGT GGGGACGTTC ATGTCGTTCA TCAAGCTCGG CTACTACATG
TTCTTCCACG GGTCGGCGAC GCTGTCACCG AAGGACGCAA CGCGGTTCCA GACCGTCGGG
ATGGTGCTGG CGGGCGGCGC GTGCGTCTTC TTCGGCACGC CGTTCACCTA CGGCTACCTC
GTCGAGCTGA TGCCGTTCAC GGCCGAGGTC GCGCCGGAAC TGCATCCCTA CAGCACGAGC
CACCTGACCG AGAGCGCCGC GCTGCTCGTG GCCGGCTTCG TCGGCTTCTT CGCGCTGAAG
CGCCCGCTCG GCTGGCTCGC CCACCACATG CGCGACGTCG ACGCCGTGAC GTACCCCGCC
GCGTTCTACC TCGCTCGCGG GTCGGTCTGG GGCGTCACCG AACTGTGGGC CGCCGTCGAC
CGCGCGGTGA TGAACGCGAT CGCGGCCGTC GAGTGGACCG CGATGCACCC GCGGGAGGCG
CTCGGGCGCG CGGGCGTCGA CGTCGAGATC CGAACCGGTA TCGGCCGGAG CGTCCTCTTC
CTGACGCTCG CCGCGGGAGT CGCGCTGTTC GTGTTCGTGC TCGGCTAG
|
|---|
| Protein sequence | MNPILTSLPP YVVLAAAAFL VLGLPRRAGH AAAALATAFT FAQAVLLGDG GTGAYVATQL
FGFDVILFNV DQFSLLMGVV VGFLATAAVL YAYGTEAPKW VTAFALIYVS STVGTIYAGD
WLTLIFFWEL MAVTSTLLVW QYGGKAVRAG YRYALFHGIG GTFLLGAVVV HGASMLGSVP
AGEIFLFSST TGIHASATLL AAIGIGVNCG FIFLHTWLPD TYPRPHVAAS VFLSVFTTKT
AVYVMYRAFP EGGMWLAYLG GFMAVYGAFF ALLQYDPRRL LSYHIQAQVG YMLAGLGLAT
AVGDFAVTGG FAHLFNNVLY KSLLFMAVGV VIYRTGVEDI RDMGGLWRVM PVTFLVYLVG
AASITAVPGF NGFISKGMVI DSAHEIHNFE LLFGEGLLWW LLILGGVGTF MSFIKLGYYM
FFHGSATLSP KDATRFQTVG MVLAGGACVF FGTPFTYGYL VELMPFTAEV APELHPYSTS
HLTESAALLV AGFVGFFALK RPLGWLAHHM RDVDAVTYPA AFYLARGSVW GVTELWAAVD
RAVMNAIAAV EWTAMHPREA LGRAGVDVEI RTGIGRSVLF LTLAAGVALF VFVLG
|
|---|
| |