Gene Hlac_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0838 
Symbol 
ID7400804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp831612 
End bp832877 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content68% 
IMG OID643707904 
Productputative monovalent cation/H+ antiporter subunit E 
Protein accessionYP_002565507 
Protein GI222479270 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACA CCGACGCCGG TAGCGACACC GCCGACAGCG AGGCCGCCGG TGGCGAAGCG 
GGTGACCCCG TCGAAGCGGG CGACGAACCG GAACACGAGT CACCGTCCGC ACCGGCTGGA
GGGATCGTCA TTCCCGTCGA ACCCACGCCG ACCCTCCGAG CGACGATCGC GCACGCGGTC
GAGGCAGCGA TCGACGAGGG CTTCTCGACG ATCCACCTCG TGGAGATTGC GTCGTGGCGC
AACGGCGACC CCGGCGCCGA CGATCGAGCG GCGGCCGCGG AGCGCGTCCT CGAACGCGCC
GAGGCGTGGG CTACCTCCGA CCTCGACGAT GTCGACGGGG AACGACCCCT AGTGACGGTC
GTGACGGAGC TCATCGGCGC CGACGAGTAC CTGTTCGGAC CCGACGACTA CGTCCGGGTG
CTCGCCGCCT ACGCGGAGGC CAACGACGCC GACAGAGTGC TTCTCGATCC GGAGTACACG
CCCGTCAGTA ACACCACCCT ACTCCAGCCG CTGGAGTTCG CGCTGTCGAA CAGTTCACTG
ACCGTCGAGA CGGCGCCAGT CACGCGGCCG ACCCGAGGCG AGCGGCTCCG GACTGAGGCC
ACCGGAAAGC GGTTCGCCGC GATGTTCGGA TTCTCGCTGG CCTTCTACTT GATTCTCGGC
GATCCCCTCT ACTGGTTCGA CTGGGTGACC GGTATCGCGA CCGCGGCGAT CGTCTCGGTT
ACCCTCTCGC GGGTCAGTAT CGACGTCGAA CCCGGTATTC CGCGGACGCC GATGCGACTG
CTCCGCGGCG TGATCTACGT CCCCGTCCTC CTCTTCGAGA TCGTGAAGGC GAACATCGAG
GTCGCCCGAG TGATACTCGA CCCGCGGCTC CCGATCGAGC CGACGATGAA CCGGATGCGC
GTGATCGTCG GCAGCGGGCT CCCGCTGATG ACGCTCGCGA ACTCGATCAC GCTGACGCCG
GGGACGCTGA CGGTTCGCGC CCGCGACAGC GACCTGTACG TCCACTCACT GATCCCGTCG
GCCCGTGACG GACTCTTCGA CGGCTCTCTC GAGCGCTGGA CGCGATTCGT CTACTACGGG
CGGGCGTCTG CGCGGCTCCC GACGCCCCGC GAGCGCGACG ACTGCGCGAT CTTACAAGGG
CCGGACGCGA CCGAGGAGAT GCCGATCGCC GCCGCTGACG GCGGGGCGGA TCCTGATACC
GGCAACGGCT CGCCAGCCGA ACCGGACGAC GAGGACCGAG AGGAGACGGA GGTAACCGAC
GAATGA
 
Protein sequence
MADTDAGSDT ADSEAAGGEA GDPVEAGDEP EHESPSAPAG GIVIPVEPTP TLRATIAHAV 
EAAIDEGFST IHLVEIASWR NGDPGADDRA AAAERVLERA EAWATSDLDD VDGERPLVTV
VTELIGADEY LFGPDDYVRV LAAYAEANDA DRVLLDPEYT PVSNTTLLQP LEFALSNSSL
TVETAPVTRP TRGERLRTEA TGKRFAAMFG FSLAFYLILG DPLYWFDWVT GIATAAIVSV
TLSRVSIDVE PGIPRTPMRL LRGVIYVPVL LFEIVKANIE VARVILDPRL PIEPTMNRMR
VIVGSGLPLM TLANSITLTP GTLTVRARDS DLYVHSLIPS ARDGLFDGSL ERWTRFVYYG
RASARLPTPR ERDDCAILQG PDATEEMPIA AADGGADPDT GNGSPAEPDD EDREETEVTD
E