Gene Hlac_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0837 
Symbol 
ID7400803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp830286 
End bp831455 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content70% 
IMG OID643707903 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 
Protein accessionYP_002565506 
Protein GI222479269 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACAGG GGGTCAACGT CGCGCTCGGT GTCTCGGGGA GCATCGCGGC GGTGAAGGTC 
GTCGAACTCG CTCACGAGCT ACGCCGCCAT GGTGCGAGCG TGCGCGCCGT CATGTCTCCG
GCGGCGACGA ACATCGTCCA CCCGTGGGCG GTCGACTTCG CGACCGACGA GCCCGTCGTC
ACCGAGATCA CCGGCGACGT GGAACACGTC GAGCTGTGCG GCCGAGAGGG GTGGGCCGAC
GTGCTCCTGC TCGCGCCCGC GACCGCGAAC ACCGCCGGGA AGGTCGCGGC TGCAGTCGAC
GATACCCCGG TCACGACTTG CGCGACGACC GCACTCGGCG CGGATCTGCC GGTCGTGATG
GCGCCGGCGA TGCACGAGCC GATGTACGAC CACCCGGGCG TGCTGGAGGC GCTCGATCGG
CTGGAGGCGT GGGGCGTGAC GTTCGCGGAT CCTCGCATCG AGGAGGGAAA GGCGAAGATC
GCCGCCGAAG AGGACATCGT GACGAAGGTC GCCCGCGCAA CCACGCCGCA GTCGCTCTCG
GGGACGCACG TCGTCGTCAC CGCGGGTGCG ACGAAAGAGC GGATCGACCC AATTCGGATC
TTGACGAACC GGGCGTCGGG GAAGACGGGG CGGGCGGTCG CTCGGGCGCT GTACGTCCGG
GGCGCGACCG TGACGCTGGT ACAGGACGGT TCGGAGGTCC CCTACGCCGA CGTGGTCGCG
GTCGAGACCG CGGCGGAGAT GATGGAGGCG TGTCGCCGGA CCGCGGCCAC CGCGGACGCG
CTGATCTCCG CGGCGGCCAT CTCCGATTTT ACCGCCGACG CGGTCGACGA GAAGATCCGA
TCCGGATCCC CGCTCTCGGT CGATCTGGAG CCGACGCCGA AGCTGATCGA CTCGGTGCGA
GAGGCGTACC CGGACCTCCC GATCGTTGGG TTCAAAGCCG AGACCTCCGG CGACGACGCG
GCGATGGTCG CGGAGGCGGA GCGGATCCGC GACCGAGTTG GACTCGTGTT CGTCGTCGCC
AACGACGCGA GCGTGATGGG GGACGACGAG ACCCGCGTCC TCCTCGTCGG CGACGAAGGG
ACCGAACCGA CGGAGGCCGT CGGCTCGAAG GATACCGTTG CCGGGCAGAT CGCAGACAGG
CTGGCCGTCG AACTCGGGTG GTCGGCGTAG
 
Protein sequence
MLQGVNVALG VSGSIAAVKV VELAHELRRH GASVRAVMSP AATNIVHPWA VDFATDEPVV 
TEITGDVEHV ELCGREGWAD VLLLAPATAN TAGKVAAAVD DTPVTTCATT ALGADLPVVM
APAMHEPMYD HPGVLEALDR LEAWGVTFAD PRIEEGKAKI AAEEDIVTKV ARATTPQSLS
GTHVVVTAGA TKERIDPIRI LTNRASGKTG RAVARALYVR GATVTLVQDG SEVPYADVVA
VETAAEMMEA CRRTAATADA LISAAAISDF TADAVDEKIR SGSPLSVDLE PTPKLIDSVR
EAYPDLPIVG FKAETSGDDA AMVAEAERIR DRVGLVFVVA NDASVMGDDE TRVLLVGDEG
TEPTEAVGSK DTVAGQIADR LAVELGWSA