Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0833 |
Symbol | |
ID | 7400799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 827390 |
End bp | 827899 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643707899 |
Product | UspA domain protein |
Protein accession | YP_002565502 |
Protein GI | 222479265 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.139589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.670884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACAG ACATCTTGTA TCCGACTGAC GGGAGTACCG GATCGAACGC GGCGGCCGAA CACGTCCGGC TGCTGGCGTC GATGTTCGAC GCGACCGTGC ACGTGCTGTG CGTCGTCGAC ACACGTCACG TGGGAATCGG AATGAGCGGC GCGTTTCTCG ACGAGGGGAC CGCGGGCATG AGTGGATCGG CCACGGACAC CGAGGGCGGC ACGGTCGGGG AGCGAGACGA CGCCGACGAG CGGCAGGCGG AGTTGCGAGA ACACGGCGAA TCGGTCGTTA AAGAAGCGAG CGCGGCGTTC GGAGATATTG AGACGACAAC GGCAGTCATG GCGGGCAATC CCCACACGAG CATCCTCGAG TACGCTGACG ATCACGACAT CGATCTGATC GTGATGGGGA CGCACGGACG GACAGGCGTC GATCGGTACC TCCTCGGTAG CGTCACCGAA AAGGTGATCC GGATGTCCGA CGCGCCCGTG ATGACGGTTC GCGCCGGAGT CGAGGACTGA
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Protein sequence | MYTDILYPTD GSTGSNAAAE HVRLLASMFD ATVHVLCVVD TRHVGIGMSG AFLDEGTAGM SGSATDTEGG TVGERDDADE RQAELREHGE SVVKEASAAF GDIETTTAVM AGNPHTSILE YADDHDIDLI VMGTHGRTGV DRYLLGSVTE KVIRMSDAPV MTVRAGVED
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