Gene Hlac_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0833 
Symbol 
ID7400799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp827390 
End bp827899 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content64% 
IMG OID643707899 
ProductUspA domain protein 
Protein accessionYP_002565502 
Protein GI222479265 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.139589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.670884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACAG ACATCTTGTA TCCGACTGAC GGGAGTACCG GATCGAACGC GGCGGCCGAA 
CACGTCCGGC TGCTGGCGTC GATGTTCGAC GCGACCGTGC ACGTGCTGTG CGTCGTCGAC
ACACGTCACG TGGGAATCGG AATGAGCGGC GCGTTTCTCG ACGAGGGGAC CGCGGGCATG
AGTGGATCGG CCACGGACAC CGAGGGCGGC ACGGTCGGGG AGCGAGACGA CGCCGACGAG
CGGCAGGCGG AGTTGCGAGA ACACGGCGAA TCGGTCGTTA AAGAAGCGAG CGCGGCGTTC
GGAGATATTG AGACGACAAC GGCAGTCATG GCGGGCAATC CCCACACGAG CATCCTCGAG
TACGCTGACG ATCACGACAT CGATCTGATC GTGATGGGGA CGCACGGACG GACAGGCGTC
GATCGGTACC TCCTCGGTAG CGTCACCGAA AAGGTGATCC GGATGTCCGA CGCGCCCGTG
ATGACGGTTC GCGCCGGAGT CGAGGACTGA
 
Protein sequence
MYTDILYPTD GSTGSNAAAE HVRLLASMFD ATVHVLCVVD TRHVGIGMSG AFLDEGTAGM 
SGSATDTEGG TVGERDDADE RQAELREHGE SVVKEASAAF GDIETTTAVM AGNPHTSILE
YADDHDIDLI VMGTHGRTGV DRYLLGSVTE KVIRMSDAPV MTVRAGVED