Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0832 |
Symbol | |
ID | 7400798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 826167 |
End bp | 827321 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643707898 |
Product | aspartate aminotransferase |
Protein accession | YP_002565501 |
Protein GI | 222479264 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0198108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG CATACGACTT TTCAGAGCGG ATCGGACGCG TAGAACCCAG CGCCACGCTG GCGATATCGA ACCTCGCGGC GGAGAAAGAG GCGGAGGGCG CTGACATCGT CGACCTGTCG GTCGGCGAGC CCGACTTCGA TACTCCAGCG AACGTCGTCG AGGCAGGCAA GGATGCCCTC GACGCCGGCC ACACGGGGTA CACCTCCTCG AACGGGATTC CCCAACTCAA AGAGGCGATC GCGGCGAAGC TCCGCGACGA CGGACTCGAC GCCGACGCCG ACGAAGTGAT CGTCACCCCC GGCGGCAAGC AGGCGCTGTA CGAGACGTTC CAGACCCTGA TCGACGACGG CGACGAGGTC GTCCTGCTGG ATCCGGCGTG GGTCTCCTAC GAGGCGATGG CAAAGCTCGC CGGCGCCGAC CTCTCGCGGG TCGATCTAGC CCCGCACGGG TTCCAGCTGG AGCCCGCGCT CGATGCGCTC GCGGAGACGG TTTCTGACGA CACCAAACTG CTCGTCGTCA ACTCCCCGTC GAACCCGACA GGTGCCGTCT TCTCGGAGAC CGCCTTGGAG GGCGTCCGCG ACCTCGCGGT CGAACACGAC ATCGCCGTGA TCTCAGACGA GATCTACGAG CAGATCACCT ACGACGCAGA GCACGTCTCG CTCGCGAGCC TTGACGGAAT GGCCGACCGG ACGATCACGA TCAACGGTTT CTCGAAGGCG TACTCGATGA CCGGCTGGCG GCTCGGCTAC CTCCACGCGA CCGACGAGTT CGTCGGGCAG GCCGGCAAGC TCCACTCGCA CTCCGTCTCG TGTGCGGTCA ACTTCGTCCA ACGCGCGGGC GTCGAGGCCC TCGAAAACAC CGACGAGTCG GTCACGGAGA TGCGCGACGC GTTCCGCGAC CGCCGCGACC TCCTCGTCGA CCTGTTCGAC GAGCACGGCG TCGACGTCGA CGTGGGCGAC GGCGCCTTCT ACATGATGAT CCCGGTCGAC GAGGACGATC AGGCGTGGTG TGAGGCCGCC ATCGAGGAGG CGTCGGTCGC CTGCGTCCCC GGGAGCGCGT TCAACGCGCC GGGCCACGCC CGGATCTCGT ACGCTGCCAG CGAGGGGCGG CTTCGCGAGG CGGTCGACCG ACTCGTCTCG AACGACCTGC TGTAG
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Protein sequence | MSDAYDFSER IGRVEPSATL AISNLAAEKE AEGADIVDLS VGEPDFDTPA NVVEAGKDAL DAGHTGYTSS NGIPQLKEAI AAKLRDDGLD ADADEVIVTP GGKQALYETF QTLIDDGDEV VLLDPAWVSY EAMAKLAGAD LSRVDLAPHG FQLEPALDAL AETVSDDTKL LVVNSPSNPT GAVFSETALE GVRDLAVEHD IAVISDEIYE QITYDAEHVS LASLDGMADR TITINGFSKA YSMTGWRLGY LHATDEFVGQ AGKLHSHSVS CAVNFVQRAG VEALENTDES VTEMRDAFRD RRDLLVDLFD EHGVDVDVGD GAFYMMIPVD EDDQAWCEAA IEEASVACVP GSAFNAPGHA RISYAASEGR LREAVDRLVS NDLL
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